c2pfam

AT4G28300.1 :

Domain Description Evalue Bits GA Start End
Utp12 Dip2/Utp12 Family 1.6E-06 17 26.00 78 154
DUF1664 Protein of unknown function (DUF1664) 0.00024 10 30.00 80 159
V_ATPase_I V-type ATPase 116kDa subunit family 0.00024 8 26.50 92 201
SQS_PSY Squalene/phytoene synthase 1.9E-05 13 26.00 94 162
DUF4363 Domain of unknown function (DUF4363) 2.7E-05 13 27.50 113 184
DUF1421 Protein of unknown function (DUF1421) 1.1E-26 82 20.00 444 487
UBA_3 Fungal ubiquitin-associated domain 4.3E-05 12 20.40 446 469

496

Utp12
DUF1664
V_ATPase_I
SQS_PSY
DUF4363
DUF1421
UBA_3

References:

DUF4363

DUF1664

Utp12
12068309 A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis. Nature 2002;0:0-0.

SQS_PSY

V_ATPase_I
10224039 Structure and properties of the vacuolar (H+)-ATPases. J Biol Chem 1999;274:12951-12954.
10340849 Structure and properties of the clathrin-coated vesicle and yeast vacuolar V-ATPases. J Bioenerg Biomembr 1999;31:57-65.

UBA_3
15328341 Solution structure of the flexible class II ubiquitin-conjugating enzyme Ubc1 provides insights for polyubiquitin chain assembly. J Biol Chem. 2004;279:47139-47147.

DUF1421

Domain	Description	Evalue	Bits	GA	Start	End
Utp12	Dip2/Utp12 Family	1.6E-06	17	26.00	78	154
DUF1664	Protein of unknown function (DUF1664)	0.00024	10	30.00	80	159
V_ATPase_I	V-type ATPase 116kDa subunit family	0.00024	8	26.50	92	201
SQS_PSY	Squalene/phytoene synthase	1.9E-05	13	26.00	94	162
DUF4363	Domain of unknown function (DUF4363)	2.7E-05	13	27.50	113	184
DUF1421	Protein of unknown function (DUF1421)	1.1E-26	82	20.00	444	487
UBA_3	Fungal ubiquitin-associated domain	4.3E-05	12	20.40	446	469