c2pfam

AT4G28470.1 :

Domain Description Evalue Bits GA Start End
RPN1_RPN2_N RPN1/RPN2 N-terminal domain 0 401 22.40 50 352
HEAT_2 HEAT repeats 0.058 2 27.70 52 73
HEAT HEAT repeat 0.13 2 23.50 52 71
PC_rep Proteasome/cyclosome repeat 1.5E-05 14 20.70 414 446
PC_rep Proteasome/cyclosome repeat 6E-08 22 20.70 448 483
HEAT_2 HEAT repeats 0.00022 10 27.70 472 531
HEAT HEAT repeat 0.82 -1 23.50 476 491
PC_rep Proteasome/cyclosome repeat 1.7E-08 23 20.70 485 515
PC_rep Proteasome/cyclosome repeat 8.7E-06 15 20.70 523 541
PC_rep Proteasome/cyclosome repeat 0.051 3 20.70 565 582
PC_rep Proteasome/cyclosome repeat 0.53 0 20.70 604 619
HEAT_2 HEAT repeats 2E-06 17 27.70 660 716
PC_rep Proteasome/cyclosome repeat 0.012 5 20.70 674 703
HEAT HEAT repeat 0.00075 9 23.50 689 714
PC_rep Proteasome/cyclosome repeat 1.9E-07 20 20.70 706 736
PC_rep Proteasome/cyclosome repeat 0.82 -1 20.70 746 756
RPN1_C 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal 1.7E-35 109 26.10 835 888

891

RPN1_RPN2_N
HEAT_2
HEAT
PC_rep
PC_rep
HEAT_2
HEAT
PC_rep
PC_rep
PC_rep
PC_rep
HEAT_2
PC_rep
HEAT
PC_rep
PC_rep
RPN1_C

References:

PC_rep
9204704 A repetitive sequence in subunits of the 26S proteasome and 20S cyclosome (anaphase-promoting complex). Trends Biochem Sci 1997;22:195-196.

HEAT_2

RPN1_C

HEAT
7550332 HEAT repeats in the Huntington's disease protein. Nat Genet 1995;11:115-116.
9989501 The structure of the protein phosphatase 2A PR65/A subunit reveals the conformation of its 15 tandemly repeated HEAT motifs. Cell 1999;96:99-110.

RPN1_RPN2_N

Domain	Description	Evalue	Bits	GA	Start	End
RPN1_RPN2_N	RPN1/RPN2 N-terminal domain	0	401	22.40	50	352
HEAT_2	HEAT repeats	0.058	2	27.70	52	73
HEAT	HEAT repeat	0.13	2	23.50	52	71
PC_rep	Proteasome/cyclosome repeat	1.5E-05	14	20.70	414	446
PC_rep	Proteasome/cyclosome repeat	6E-08	22	20.70	448	483
HEAT_2	HEAT repeats	0.00022	10	27.70	472	531
HEAT	HEAT repeat	0.82	-1	23.50	476	491
PC_rep	Proteasome/cyclosome repeat	1.7E-08	23	20.70	485	515
PC_rep	Proteasome/cyclosome repeat	8.7E-06	15	20.70	523	541
PC_rep	Proteasome/cyclosome repeat	0.051	3	20.70	565	582
PC_rep	Proteasome/cyclosome repeat	0.53	0	20.70	604	619
HEAT_2	HEAT repeats	2E-06	17	27.70	660	716
PC_rep	Proteasome/cyclosome repeat	0.012	5	20.70	674	703
HEAT	HEAT repeat	0.00075	9	23.50	689	714
PC_rep	Proteasome/cyclosome repeat	1.9E-07	20	20.70	706	736
PC_rep	Proteasome/cyclosome repeat	0.82	-1	20.70	746	756
RPN1_C	26S proteasome non-ATPase regulatory subunit RPN1 C-terminal	1.7E-35	109	26.10	835	888