c2pfam

AT4G28490.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 7.9E-13 38 20.70 22 62
LRR_8 Leucine rich repeat 1.4E-06 18 27.00 77 126
LRR_4 Leucine Rich repeats (2 copies) 0.0038 7 27.00 85 102
LRR_4 Leucine Rich repeats (2 copies) 2E-05 15 27.00 89 131
LRR_1 Leucine Rich Repeat 0.16 3 20.60 90 111
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.00046 10 27.70 104 173
LRR_6 Leucine Rich repeat 0.079 3 23.40 112 125
LRR_1 Leucine Rich Repeat 0.047 4 20.60 115 134
LRR_4 Leucine Rich repeats (2 copies) 1.8E-07 21 27.00 115 153
LRR_8 Leucine rich repeat 3E-09 26 27.00 129 173
LRR_6 Leucine Rich repeat 0.0026 8 23.40 139 154
LRR_4 Leucine Rich repeats (2 copies) 9.3E-08 22 27.00 139 179
LRR_1 Leucine Rich Repeat 0.00029 11 20.60 140 161
LRR_6 Leucine Rich repeat 0.11 3 23.40 163 173
LRR_8 Leucine rich repeat 1.6E-07 21 27.00 163 224
LRR_1 Leucine Rich Repeat 0.00012 12 20.60 164 185
LRR_4 Leucine Rich repeats (2 copies) 0.00011 12 27.00 164 200
LRR_6 Leucine Rich repeat 0.1 3 23.40 187 200
LRR_4 Leucine Rich repeats (2 copies) 9.8E-05 12 27.00 188 230
LRR_1 Leucine Rich Repeat 0.011 6 20.60 214 235
LRR_4 Leucine Rich repeats (2 copies) 0.00078 10 27.00 236 272
LRR_6 Leucine Rich repeat 0.023 5 23.40 236 250
LRR_8 Leucine rich repeat 2.7E-07 20 27.00 237 296
LRR_1 Leucine Rich Repeat 0.058 4 20.60 238 256
LRR_8 Leucine rich repeat 0.018 4 27.00 278 319
LRR_4 Leucine Rich repeats (2 copies) 3.8E-05 14 27.00 285 317
LRR_8 Leucine rich repeat 0.0069 6 27.00 305 343
LRR_1 Leucine Rich Repeat 0.078 4 20.60 308 327
LRR_6 Leucine Rich repeat 0.67 0 23.40 330 345
LRR_8 Leucine rich repeat 2.7E-07 20 27.00 332 390
LRR_4 Leucine Rich repeats (2 copies) 6E-05 13 27.00 332 368
LRR_6 Leucine Rich repeat 0.0048 7 23.40 354 370
LRR_1 Leucine Rich Repeat 0.032 5 20.60 357 375
LRR_1 Leucine Rich Repeat 0.099 3 20.60 380 402
LRR_4 Leucine Rich repeats (2 copies) 7.5E-05 13 27.00 380 416
LRR_6 Leucine Rich repeat 0.028 4 23.40 401 417
LRR_4 Leucine Rich repeats (2 copies) 5.8E-07 19 27.00 403 443
LRR_1 Leucine Rich Repeat 0.063 4 20.60 404 426
LRR_8 Leucine rich repeat 3.4E-10 29 27.00 404 463
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.82 -1 27.70 416 416
LRR_4 Leucine Rich repeats (2 copies) 0.0016 9 27.00 427 467
LRR_1 Leucine Rich Repeat 0.22 2 20.60 429 446
LRR_1 Leucine Rich Repeat 0.22 2 20.60 452 474
LRR_4 Leucine Rich repeats (2 copies) 0.0022 8 27.00 490 511
LRR_8 Leucine rich repeat 2.4E-08 23 27.00 492 535
LRR_4 Leucine Rich repeats (2 copies) 3.8E-06 17 27.00 500 537
LRR_1 Leucine Rich Repeat 0.01 6 20.60 501 519
LRR_6 Leucine Rich repeat 0.024 5 23.40 501 514
LRR_4 Leucine Rich repeats (2 copies) 2.8E-06 17 27.00 523 563
LRR_1 Leucine Rich Repeat 0.015 6 20.60 524 541
LRR_6 Leucine Rich repeat 0.017 5 23.40 524 538
LRR_8 Leucine rich repeat 3E-05 13 27.00 546 582
LRR_6 Leucine Rich repeat 0.0041 7 23.40 549 562
LRR_1 Leucine Rich Repeat 0.0066 7 20.60 549 570
LRR_4 Leucine Rich repeats (2 copies) 1.1E-05 15 27.00 549 589
LRR_6 Leucine Rich repeat 0.0017 8 23.40 568 584
LRR_1 Leucine Rich Repeat 0.0079 7 20.60 571 588
TMEM132D_C Mature oligodendrocyte transmembrane protein, TMEM132D, C-term 3.4E-05 13 27.00 625 657
Pkinase Protein kinase domain 0 147 20.40 685 937
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 128 23.10 686 911
APH Phosphotransferase enzyme family 8.3E-05 12 22.40 778 844

999

LRRNT_2
LRR_8
LRR_4
LRR_4
LRR_1
LRR_5
LRR_6
LRR_1
LRR_4
LRR_8
LRR_6
LRR_4
LRR_1
LRR_6
LRR_8
LRR_1
LRR_4
LRR_6
LRR_4
LRR_1
LRR_4
LRR_6
LRR_8
LRR_1
LRR_8
LRR_4
LRR_8
LRR_1
LRR_6
LRR_8
LRR_4
LRR_6
LRR_1
LRR_1
LRR_4
LRR_6
LRR_4
LRR_1
LRR_8
LRR_5
LRR_4
LRR_1
LRR_1
LRR_4
LRR_8
LRR_4
LRR_1
LRR_6
LRR_4
LRR_1
LRR_6
LRR_8
LRR_6
LRR_1
LRR_4
LRR_6
LRR_1
TMEM132D_C
Pkinase
PK_Tyr_Ser-Thr
APH

References:

LRR_8

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

TMEM132D_C

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

LRR_5

LRR_4

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	7.9E-13	38	20.70	22	62
LRR_8	Leucine rich repeat	1.4E-06	18	27.00	77	126
LRR_4	Leucine Rich repeats (2 copies)	0.0038	7	27.00	85	102
LRR_4	Leucine Rich repeats (2 copies)	2E-05	15	27.00	89	131
LRR_1	Leucine Rich Repeat	0.16	3	20.60	90	111
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.00046	10	27.70	104	173
LRR_6	Leucine Rich repeat	0.079	3	23.40	112	125
LRR_1	Leucine Rich Repeat	0.047	4	20.60	115	134
LRR_4	Leucine Rich repeats (2 copies)	1.8E-07	21	27.00	115	153
LRR_8	Leucine rich repeat	3E-09	26	27.00	129	173
LRR_6	Leucine Rich repeat	0.0026	8	23.40	139	154
LRR_4	Leucine Rich repeats (2 copies)	9.3E-08	22	27.00	139	179
LRR_1	Leucine Rich Repeat	0.00029	11	20.60	140	161
LRR_6	Leucine Rich repeat	0.11	3	23.40	163	173
LRR_8	Leucine rich repeat	1.6E-07	21	27.00	163	224
LRR_1	Leucine Rich Repeat	0.00012	12	20.60	164	185
LRR_4	Leucine Rich repeats (2 copies)	0.00011	12	27.00	164	200
LRR_6	Leucine Rich repeat	0.1	3	23.40	187	200
LRR_4	Leucine Rich repeats (2 copies)	9.8E-05	12	27.00	188	230
LRR_1	Leucine Rich Repeat	0.011	6	20.60	214	235
LRR_4	Leucine Rich repeats (2 copies)	0.00078	10	27.00	236	272
LRR_6	Leucine Rich repeat	0.023	5	23.40	236	250
LRR_8	Leucine rich repeat	2.7E-07	20	27.00	237	296
LRR_1	Leucine Rich Repeat	0.058	4	20.60	238	256
LRR_8	Leucine rich repeat	0.018	4	27.00	278	319
LRR_4	Leucine Rich repeats (2 copies)	3.8E-05	14	27.00	285	317
LRR_8	Leucine rich repeat	0.0069	6	27.00	305	343
LRR_1	Leucine Rich Repeat	0.078	4	20.60	308	327
LRR_6	Leucine Rich repeat	0.67	0	23.40	330	345
LRR_8	Leucine rich repeat	2.7E-07	20	27.00	332	390
LRR_4	Leucine Rich repeats (2 copies)	6E-05	13	27.00	332	368
LRR_6	Leucine Rich repeat	0.0048	7	23.40	354	370
LRR_1	Leucine Rich Repeat	0.032	5	20.60	357	375
LRR_1	Leucine Rich Repeat	0.099	3	20.60	380	402
LRR_4	Leucine Rich repeats (2 copies)	7.5E-05	13	27.00	380	416
LRR_6	Leucine Rich repeat	0.028	4	23.40	401	417
LRR_4	Leucine Rich repeats (2 copies)	5.8E-07	19	27.00	403	443
LRR_1	Leucine Rich Repeat	0.063	4	20.60	404	426
LRR_8	Leucine rich repeat	3.4E-10	29	27.00	404	463
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.82	-1	27.70	416	416
LRR_4	Leucine Rich repeats (2 copies)	0.0016	9	27.00	427	467
LRR_1	Leucine Rich Repeat	0.22	2	20.60	429	446
LRR_1	Leucine Rich Repeat	0.22	2	20.60	452	474
LRR_4	Leucine Rich repeats (2 copies)	0.0022	8	27.00	490	511
LRR_8	Leucine rich repeat	2.4E-08	23	27.00	492	535
LRR_4	Leucine Rich repeats (2 copies)	3.8E-06	17	27.00	500	537
LRR_1	Leucine Rich Repeat	0.01	6	20.60	501	519
LRR_6	Leucine Rich repeat	0.024	5	23.40	501	514
LRR_4	Leucine Rich repeats (2 copies)	2.8E-06	17	27.00	523	563
LRR_1	Leucine Rich Repeat	0.015	6	20.60	524	541
LRR_6	Leucine Rich repeat	0.017	5	23.40	524	538
LRR_8	Leucine rich repeat	3E-05	13	27.00	546	582
LRR_6	Leucine Rich repeat	0.0041	7	23.40	549	562
LRR_1	Leucine Rich Repeat	0.0066	7	20.60	549	570
LRR_4	Leucine Rich repeats (2 copies)	1.1E-05	15	27.00	549	589
LRR_6	Leucine Rich repeat	0.0017	8	23.40	568	584
LRR_1	Leucine Rich Repeat	0.0079	7	20.60	571	588
TMEM132D_C	Mature oligodendrocyte transmembrane protein, TMEM132D, C-term	3.4E-05	13	27.00	625	657
Pkinase	Protein kinase domain	0	147	20.40	685	937
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	128	23.10	686	911
APH	Phosphotransferase enzyme family	8.3E-05	12	22.40	778	844