c2pfam

AT4G29940.1 :

Domain Description Evalue Bits GA Start End
DUF1491 Protein of unknown function (DUF1491) 0.0051 6 25.00 35 90
zf-RING_2 Ring finger domain 0.27 1 27.30 190 197
PHD_2 PHD-finger 0.83 -2 28.00 191 197
PHD PHD-finger 4.9E-15 44 27.90 192 247
zf-RING_2 Ring finger domain 0.0016 8 27.30 193 244
zf-rbx1 RING-H2 zinc finger domain 6.7E-05 12 31.00 195 231
PHD_2 PHD-finger 0.00038 9 28.00 205 244
DUF1491 Protein of unknown function (DUF1491) 0.033 4 25.00 445 494
Homeodomain Homeodomain 4.3E-11 32 22.90 462 505
Homeobox_KN Homeobox KN domain 8.3E-06 15 19.80 478 505
Homeodomain Homeodomain 0.09 2 22.90 707 726

796

DUF1491
zf-RING_2
PHD_2
PHD
zf-RING_2
zf-rbx1
PHD_2
DUF1491
Homeodomain
Homeobox_KN
Homeodomain

References:

Homeodomain

DUF1491

zf-rbx1

PHD_2

zf-RING_2

PHD
7701562 The PHD finger: implications for chromatin-mediated transcriptional regulation. Trends Biochem Sci 1995;20:56-59.
11124022 Structure of the PHD zinc finger from human williams-beuren syndrome transcription factor J Mol Biol 2000;304:723-729.
17142463 Proteome-wide analysis in S. cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36. J Biol Chem. 2006; [Epub ahead of print]

Homeobox_KN

Domain	Description	Evalue	Bits	GA	Start	End
DUF1491	Protein of unknown function (DUF1491)	0.0051	6	25.00	35	90
zf-RING_2	Ring finger domain	0.27	1	27.30	190	197
PHD_2	PHD-finger	0.83	-2	28.00	191	197
PHD	PHD-finger	4.9E-15	44	27.90	192	247
zf-RING_2	Ring finger domain	0.0016	8	27.30	193	244
zf-rbx1	RING-H2 zinc finger domain	6.7E-05	12	31.00	195	231
PHD_2	PHD-finger	0.00038	9	28.00	205	244
DUF1491	Protein of unknown function (DUF1491)	0.033	4	25.00	445	494
Homeodomain	Homeodomain	4.3E-11	32	22.90	462	505
Homeobox_KN	Homeobox KN domain	8.3E-06	15	19.80	478	505
Homeodomain	Homeodomain	0.09	2	22.90	707	726