c2pfam

AT4G31490.1 :

Domain Description Evalue Bits GA Start End
Cnd1 non-SMC mitotic condensation complex subunit 1 0.11 2 26.40 10 109
Adaptin_N Adaptin N terminal region 0 308 20.30 20 476
HEAT HEAT repeat 0.23 2 23.50 100 123
HEAT_2 HEAT repeats 1.9E-05 15 27.70 101 158
Cnd1 non-SMC mitotic condensation complex subunit 1 1.6E-10 31 26.40 112 262
HEAT HEAT repeat 2.2E-05 14 23.50 133 160
HEAT_2 HEAT repeats 0.036 4 27.70 177 213
HEAT_2 HEAT repeats 0.53 0 27.70 238 276
HEAT HEAT repeat 0.33 1 23.50 246 271
HEAT_2 HEAT repeats 0.34 1 27.70 284 345
Cnd1 non-SMC mitotic condensation complex subunit 1 0.25 1 26.40 286 347
Coatamer_beta_C Coatamer beta C-terminal region 0 192 21.60 669 807
Gemini_V2 Geminivirus V2 protein 0.00026 11 21.20 725 794
Alpha_adaptinC2 Adaptin C-terminal domain 0.00012 12 20.60 737 794
RAG2 Recombination activating protein 2 7.1E-05 11 19.40 794 851
Coatomer_b_Cpla Coatomer beta subunit appendage platform 0 191 32.70 813 940
Coatomer_g_Cpla Coatomer subunit gamma-1 C-terminal appendage platform 1.1E-05 15 31.20 828 934

948

Cnd1
Adaptin_N
HEAT
HEAT_2
Cnd1
HEAT
HEAT_2
HEAT_2
HEAT
HEAT_2
Cnd1
Coatamer_beta_C
Gemini_V2
Alpha_adaptinC2
RAG2
Coatomer_b_Cpla
Coatomer_g_Cpla

References:

HEAT_2

Gemini_V2

Alpha_adaptinC2
10430869 Crystal structure of the alpha appendage of AP-2 reveals a recruitment platform for clathrin-coat assembly Proc Natl Acad Sci U S A 1999;96:8907-8912.

RAG2
2360047 RAG-1 and RAG-2, adjacent genes that synergistically activate V(D)J recombination. Science 1990;248:1517-1523.

Coatamer_beta_C

Adaptin_N
9261055 Linking cargo to vesicle formation: receptor tail interactions with coat proteins. Curr Opin Cell Biol 1997;9:488-495.
2495531 Structural and functional division into two domains of the large (100- to 115-kDa)chains of the clathrin-associated protein complex AP-2. Proc Natl Acad Sci U S A 1989;86:2612-2616.

Coatomer_b_Cpla

HEAT
7550332 HEAT repeats in the Huntington's disease protein. Nat Genet 1995;11:115-116.
9989501 The structure of the protein phosphatase 2A PR65/A subunit reveals the conformation of its 15 tandemly repeated HEAT motifs. Cell 1999;96:99-110.

Coatomer_g_Cpla

Cnd1

Domain	Description	Evalue	Bits	GA	Start	End
Cnd1	non-SMC mitotic condensation complex subunit 1	0.11	2	26.40	10	109
Adaptin_N	Adaptin N terminal region	0	308	20.30	20	476
HEAT	HEAT repeat	0.23	2	23.50	100	123
HEAT_2	HEAT repeats	1.9E-05	15	27.70	101	158
Cnd1	non-SMC mitotic condensation complex subunit 1	1.6E-10	31	26.40	112	262
HEAT	HEAT repeat	2.2E-05	14	23.50	133	160
HEAT_2	HEAT repeats	0.036	4	27.70	177	213
HEAT_2	HEAT repeats	0.53	0	27.70	238	276
HEAT	HEAT repeat	0.33	1	23.50	246	271
HEAT_2	HEAT repeats	0.34	1	27.70	284	345
Cnd1	non-SMC mitotic condensation complex subunit 1	0.25	1	26.40	286	347
Coatamer_beta_C	Coatamer beta C-terminal region	0	192	21.60	669	807
Gemini_V2	Geminivirus V2 protein	0.00026	11	21.20	725	794
Alpha_adaptinC2	Adaptin C-terminal domain	0.00012	12	20.60	737	794
RAG2	Recombination activating protein 2	7.1E-05	11	19.40	794	851
Coatomer_b_Cpla	Coatomer beta subunit appendage platform	0	191	32.70	813	940
Coatomer_g_Cpla	Coatomer subunit gamma-1 C-terminal appendage platform	1.1E-05	15	31.20	828	934