c2pfam

AT4G34380.1 :

Domain Description Evalue Bits GA Start End
WD40 WD domain, G-beta repeat 1.4E-05 15 21.00 125 151
PQQ_3 PQQ-like domain 0.00058 9 22.00 128 148
BBS2_Mid Ciliary BBSome complex subunit 2, middle region 0.00093 8 27.00 138 193
Nucleoporin_N Nup133 N terminal like 0.00098 6 23.70 160 200
PQQ_3 PQQ-like domain 0.017 4 22.00 167 186
Nup160 Nucleoporin Nup120/160 0.00069 7 19.20 172 266
WD40 WD domain, G-beta repeat 0.00013 11 21.00 173 189
Nucleoporin_N Nup133 N terminal like 0.00047 7 23.70 209 273
WD40 WD domain, G-beta repeat 2.3E-05 14 21.00 233 262
WD40 WD domain, G-beta repeat 9.1E-08 21 21.00 268 304
PQQ_3 PQQ-like domain 0.0016 8 22.00 278 300
Nup160 Nucleoporin Nup120/160 0.0026 5 19.20 278 317
BBS2_Mid Ciliary BBSome complex subunit 2, middle region 0.049 2 27.00 290 305
Nucleoporin_N Nup133 N terminal like 0.0048 4 23.70 314 354
WD40 WD domain, G-beta repeat 0.0029 7 21.00 325 351
PQQ_3 PQQ-like domain 0.21 1 22.00 338 347
WD40 WD domain, G-beta repeat 1.3E-06 18 21.00 361 392
PQQ_3 PQQ-like domain 0.44 0 22.00 374 391
BBS2_Mid Ciliary BBSome complex subunit 2, middle region 0.39 -1 27.00 378 395
WD40 WD domain, G-beta repeat 2E-08 24 21.00 402 454
Nucleoporin_N Nup133 N terminal like 0.03 1 23.70 423 459
Nup160 Nucleoporin Nup120/160 0.0096 3 19.20 430 483
BBS2_Mid Ciliary BBSome complex subunit 2, middle region 0.65 -1 27.00 445 463

495

WD40
PQQ_3
BBS2_Mid
Nucleoporin_N
PQQ_3
Nup160
WD40
Nucleoporin_N
WD40
WD40
PQQ_3
Nup160
BBS2_Mid
Nucleoporin_N
WD40
PQQ_3
WD40
PQQ_3
BBS2_Mid
WD40
Nucleoporin_N
Nup160
BBS2_Mid

References:

BBS2_Mid

PQQ_3

Nup160
8557736 Nup120p: a yeast nucleoporin required for NPC distribution and mRNA transport. J Cell Biol. 1995;131:1659-1675.
11684705 Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export. J Cell Biol 2001;155:339-354.
17360435 Cell-cycle-dependent phosphorylation of the nuclear pore Nup107-160 subcomplex. Proc Natl Acad Sci U S A. 2007;104:3811-3816.

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

Nucleoporin_N
15557116 Structural and functional analysis of Nup133 domains reveals modular building blocks of the nuclear pore complex. J Cell Biol. 2004;167:591-597.

Domain	Description	Evalue	Bits	GA	Start	End
WD40	WD domain, G-beta repeat	1.4E-05	15	21.00	125	151
PQQ_3	PQQ-like domain	0.00058	9	22.00	128	148
BBS2_Mid	Ciliary BBSome complex subunit 2, middle region	0.00093	8	27.00	138	193
Nucleoporin_N	Nup133 N terminal like	0.00098	6	23.70	160	200
PQQ_3	PQQ-like domain	0.017	4	22.00	167	186
Nup160	Nucleoporin Nup120/160	0.00069	7	19.20	172	266
WD40	WD domain, G-beta repeat	0.00013	11	21.00	173	189
Nucleoporin_N	Nup133 N terminal like	0.00047	7	23.70	209	273
WD40	WD domain, G-beta repeat	2.3E-05	14	21.00	233	262
WD40	WD domain, G-beta repeat	9.1E-08	21	21.00	268	304
PQQ_3	PQQ-like domain	0.0016	8	22.00	278	300
Nup160	Nucleoporin Nup120/160	0.0026	5	19.20	278	317
BBS2_Mid	Ciliary BBSome complex subunit 2, middle region	0.049	2	27.00	290	305
Nucleoporin_N	Nup133 N terminal like	0.0048	4	23.70	314	354
WD40	WD domain, G-beta repeat	0.0029	7	21.00	325	351
PQQ_3	PQQ-like domain	0.21	1	22.00	338	347
WD40	WD domain, G-beta repeat	1.3E-06	18	21.00	361	392
PQQ_3	PQQ-like domain	0.44	0	22.00	374	391
BBS2_Mid	Ciliary BBSome complex subunit 2, middle region	0.39	-1	27.00	378	395
WD40	WD domain, G-beta repeat	2E-08	24	21.00	402	454
Nucleoporin_N	Nup133 N terminal like	0.03	1	23.70	423	459
Nup160	Nucleoporin Nup120/160	0.0096	3	19.20	430	483
BBS2_Mid	Ciliary BBSome complex subunit 2, middle region	0.65	-1	27.00	445	463