c2pfam

AT4G34610.1 :

Domain Description Evalue Bits GA Start End
OmpH Outer membrane protein (OmpH-like) 5.3E-05 13 28.70 136 250
FlaG FlaG protein 0.031 4 21.00 136 155
Syntaxin-18_N SNARE-complex protein Syntaxin-18 N-terminus 0.67 0 21.00 139 165
POX Associated with HOX 0 167 20.90 141 268
CCDC53 Subunit CCDC53 of WASH complex 8.7E-05 13 24.50 143 233
MscS_porin Mechanosensitive ion channel porin domain 0.0002 10 34.40 145 229
Syntaxin-18_N SNARE-complex protein Syntaxin-18 N-terminus 0.00072 9 21.00 157 227
Unpaired Unpaired protein 5.7E-05 12 27.00 158 237
FlaG FlaG protein 0.022 5 21.00 172 216
Homeobox_KN Homeobox KN domain 3.2E-20 61 19.80 332 371
Homeodomain Homeodomain 1.3E-09 27 22.90 334 371
Homez Homeodomain leucine-zipper encoding, Homez 0.00017 11 20.10 344 365

532

OmpH
FlaG
Syntaxin-18_N
POX
CCDC53
MscS_porin
Syntaxin-18_N
Unpaired
FlaG
Homeobox_KN
Homeodomain
Homez

References:

POX
11779830 Systematic identification of novel protein domain families associated with nuclear functions. Genome Res 2002;12:47-56.

Homeobox_KN

Homeodomain

CCDC53

Homez
12925734 Homez, a homeobox leucine zipper gene specific to the vertebrate lineage. Proc Natl Acad Sci U S A. 2003;100:10358-10363.

OmpH
2318304 Bacterial 'histone-like protein I' (HLP-I) is an outer membrane constituent? FEBS Lett 1990;262:123-126.
15304217 Crystal structure of Skp, a prefoldin-like chaperone that protects soluble and membrane proteins from aggregation. Mol Cell 2004;15:367-374.

MscS_porin

FlaG

Syntaxin-18_N
10788491 Syntaxin 18, a SNAP receptor that functions in the endoplasmic reticulum, intermediate compartment, and cis-Golgi vesicle trafficking. J Biol Chem. 2000;275:13713-13720.
16790498 Involvement of syntaxin 18, an endoplasmic reticulum (ER)-localized SNARE protein, in ER-mediated phagocytosis. Mol Biol Cell. 2006;17:3964-3977.

Unpaired

Domain	Description	Evalue	Bits	GA	Start	End
OmpH	Outer membrane protein (OmpH-like)	5.3E-05	13	28.70	136	250
FlaG	FlaG protein	0.031	4	21.00	136	155
Syntaxin-18_N	SNARE-complex protein Syntaxin-18 N-terminus	0.67	0	21.00	139	165
POX	Associated with HOX	0	167	20.90	141	268
CCDC53	Subunit CCDC53 of WASH complex	8.7E-05	13	24.50	143	233
MscS_porin	Mechanosensitive ion channel porin domain	0.0002	10	34.40	145	229
Syntaxin-18_N	SNARE-complex protein Syntaxin-18 N-terminus	0.00072	9	21.00	157	227
Unpaired	Unpaired protein	5.7E-05	12	27.00	158	237
FlaG	FlaG protein	0.022	5	21.00	172	216
Homeobox_KN	Homeobox KN domain	3.2E-20	61	19.80	332	371
Homeodomain	Homeodomain	1.3E-09	27	22.90	334	371
Homez	Homeodomain leucine-zipper encoding, Homez	0.00017	11	20.10	344	365