c2pfam

AT4G35470.1 :

Domain Description Evalue Bits GA Start End
Glyco_hydro_20 Glycosyl hydrolase family 20, catalytic domain 4.4E-05 12 20.60 7 120
LRR_4 Leucine Rich repeats (2 copies) 3.8E-05 13 27.00 224 258
LRR_9 Leucine-rich repeat 6.8E-06 15 30.50 224 321
RsmF_methylt_CI RsmF rRNA methyltransferase first C-terminal domain 0.44 0 27.00 232 248
LRR_8 Leucine rich repeat 3.5E-11 32 27.00 239 281
LRR_6 Leucine Rich repeat 0.00092 9 23.40 246 258
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.00076 9 27.70 247 354
LRR_4 Leucine Rich repeats (2 copies) 3.9E-09 26 27.00 247 285
LRR_1 Leucine Rich Repeat 0.008 6 20.60 247 267
LRR_6 Leucine Rich repeat 0.0055 6 23.40 269 282
LRR_8 Leucine rich repeat 4.8E-14 41 27.00 270 327
LRR_1 Leucine Rich Repeat 0.014 6 20.60 270 287
LRR_4 Leucine Rich repeats (2 copies) 3.5E-08 23 27.00 270 308
LRR_4 Leucine Rich repeats (2 copies) 1.4E-07 21 27.00 293 329
LRR_1 Leucine Rich Repeat 0.0022 8 20.60 293 311
LRR_8 Leucine rich repeat 2E-12 36 27.00 293 350
LRR_6 Leucine Rich repeat 0.034 4 23.40 293 305
LRR_9 Leucine-rich repeat 0.0027 6 30.50 312 413
LRR_1 Leucine Rich Repeat 0.0014 9 20.60 316 337
LRR_4 Leucine Rich repeats (2 copies) 5.1E-07 19 27.00 316 354
LRR_6 Leucine Rich repeat 0.0031 7 23.40 317 327
LRR_8 Leucine rich repeat 5.2E-05 12 27.00 331 373
LRR_6 Leucine Rich repeat 0.21 1 23.40 339 350
LRR_1 Leucine Rich Repeat 0.18 2 20.60 339 358
LRR_4 Leucine Rich repeats (2 copies) 0.00017 11 27.00 362 399
LRR_8 Leucine rich repeat 4.1E-09 25 27.00 365 419
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.027 4 27.70 382 443
LRR_6 Leucine Rich repeat 0.0073 6 23.40 384 396
LRR_4 Leucine Rich repeats (2 copies) 2.4E-06 17 27.00 384 422
LRR_1 Leucine Rich Repeat 0.23 2 20.60 386 400
LRR_1 Leucine Rich Repeat 0.008 6 20.60 408 425
LRR_4 Leucine Rich repeats (2 copies) 0.0014 8 27.00 408 439
LRR_6 Leucine Rich repeat 0.0018 8 23.40 408 420
LRR_6 Leucine Rich repeat 0.84 -1 23.40 430 440
LRR_8 Leucine rich repeat 1.6E-09 27 27.00 431 490
LRR_1 Leucine Rich Repeat 0.26 2 20.60 432 452
LRR_9 Leucine-rich repeat 0.018 4 30.50 454 490
LRR_6 Leucine Rich repeat 0.0026 7 23.40 456 467
LRR_4 Leucine Rich repeats (2 copies) 5.5E-07 19 27.00 456 485
LRR_1 Leucine Rich Repeat 0.00015 12 20.60 457 475
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.52 -1 27.70 457 484
RsmF_methylt_CI RsmF rRNA methyltransferase first C-terminal domain 0.00047 9 27.00 457 485

549

Glyco_hydro_20
LRR_4
LRR_9
RsmF_methylt_CI
LRR_8
LRR_6
LRR_5
LRR_4
LRR_1
LRR_6
LRR_8
LRR_1
LRR_4
LRR_4
LRR_1
LRR_8
LRR_6
LRR_9
LRR_1
LRR_4
LRR_6
LRR_8
LRR_6
LRR_1
LRR_4
LRR_8
LRR_5
LRR_6
LRR_4
LRR_1
LRR_1
LRR_4
LRR_6
LRR_6
LRR_8
LRR_1
LRR_9
LRR_6
LRR_4
LRR_1
LRR_5
RsmF_methylt_CI

References:

LRR_9

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

Glyco_hydro_20
8673609 Bacterial chitobiase structure provides insight into catalytic mechanism and the basis of Tay-Sachs disease. Nat Struct Biol 1996;3:638-648.

RsmF_methylt_CI

LRR_8

LRR_6

LRR_5

LRR_4

Domain	Description	Evalue	Bits	GA	Start	End
Glyco_hydro_20	Glycosyl hydrolase family 20, catalytic domain	4.4E-05	12	20.60	7	120
LRR_4	Leucine Rich repeats (2 copies)	3.8E-05	13	27.00	224	258
LRR_9	Leucine-rich repeat	6.8E-06	15	30.50	224	321
RsmF_methylt_CI	RsmF rRNA methyltransferase first C-terminal domain	0.44	0	27.00	232	248
LRR_8	Leucine rich repeat	3.5E-11	32	27.00	239	281
LRR_6	Leucine Rich repeat	0.00092	9	23.40	246	258
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.00076	9	27.70	247	354
LRR_4	Leucine Rich repeats (2 copies)	3.9E-09	26	27.00	247	285
LRR_1	Leucine Rich Repeat	0.008	6	20.60	247	267
LRR_6	Leucine Rich repeat	0.0055	6	23.40	269	282
LRR_8	Leucine rich repeat	4.8E-14	41	27.00	270	327
LRR_1	Leucine Rich Repeat	0.014	6	20.60	270	287
LRR_4	Leucine Rich repeats (2 copies)	3.5E-08	23	27.00	270	308
LRR_4	Leucine Rich repeats (2 copies)	1.4E-07	21	27.00	293	329
LRR_1	Leucine Rich Repeat	0.0022	8	20.60	293	311
LRR_8	Leucine rich repeat	2E-12	36	27.00	293	350
LRR_6	Leucine Rich repeat	0.034	4	23.40	293	305
LRR_9	Leucine-rich repeat	0.0027	6	30.50	312	413
LRR_1	Leucine Rich Repeat	0.0014	9	20.60	316	337
LRR_4	Leucine Rich repeats (2 copies)	5.1E-07	19	27.00	316	354
LRR_6	Leucine Rich repeat	0.0031	7	23.40	317	327
LRR_8	Leucine rich repeat	5.2E-05	12	27.00	331	373
LRR_6	Leucine Rich repeat	0.21	1	23.40	339	350
LRR_1	Leucine Rich Repeat	0.18	2	20.60	339	358
LRR_4	Leucine Rich repeats (2 copies)	0.00017	11	27.00	362	399
LRR_8	Leucine rich repeat	4.1E-09	25	27.00	365	419
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.027	4	27.70	382	443
LRR_6	Leucine Rich repeat	0.0073	6	23.40	384	396
LRR_4	Leucine Rich repeats (2 copies)	2.4E-06	17	27.00	384	422
LRR_1	Leucine Rich Repeat	0.23	2	20.60	386	400
LRR_1	Leucine Rich Repeat	0.008	6	20.60	408	425
LRR_4	Leucine Rich repeats (2 copies)	0.0014	8	27.00	408	439
LRR_6	Leucine Rich repeat	0.0018	8	23.40	408	420
LRR_6	Leucine Rich repeat	0.84	-1	23.40	430	440
LRR_8	Leucine rich repeat	1.6E-09	27	27.00	431	490
LRR_1	Leucine Rich Repeat	0.26	2	20.60	432	452
LRR_9	Leucine-rich repeat	0.018	4	30.50	454	490
LRR_6	Leucine Rich repeat	0.0026	7	23.40	456	467
LRR_4	Leucine Rich repeats (2 copies)	5.5E-07	19	27.00	456	485
LRR_1	Leucine Rich Repeat	0.00015	12	20.60	457	475
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.52	-1	27.70	457	484
RsmF_methylt_CI	RsmF rRNA methyltransferase first C-terminal domain	0.00047	9	27.00	457	485