c2pfam

AT4G36180.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 1.1E-12 38 20.70 26 65
LRR_6 Leucine Rich repeat 0.17 2 23.40 92 105
LRR_4 Leucine Rich repeats (2 copies) 0.0052 7 27.00 93 129
LRR_1 Leucine Rich Repeat 0.05 4 20.60 94 112
LRR_8 Leucine rich repeat 6.3E-09 25 27.00 94 152
LRR_6 Leucine Rich repeat 0.2 2 23.40 139 155
LRR_4 Leucine Rich repeats (2 copies) 2.5E-05 14 27.00 140 178
LRR_1 Leucine Rich Repeat 0.66 1 20.60 141 157
LRR_6 Leucine Rich repeat 0.058 4 23.40 162 176
LRR_8 Leucine rich repeat 1.1E-09 28 27.00 163 222
LRR_1 Leucine Rich Repeat 0.021 6 20.60 163 185
LRR_4 Leucine Rich repeats (2 copies) 4.5E-08 23 27.00 186 222
LRR_6 Leucine Rich repeat 0.0068 6 23.40 186 201
LRR_1 Leucine Rich Repeat 0.00016 12 20.60 187 209
LRR_1 Leucine Rich Repeat 0.065 4 20.60 211 233
LRR_8 Leucine rich repeat 1.8E-10 30 27.00 211 270
LRR_4 Leucine Rich repeats (2 copies) 5.5E-07 20 27.00 235 270
LRR_6 Leucine Rich repeat 0.034 4 23.40 258 272
LRR_1 Leucine Rich Repeat 0.0096 7 20.60 259 275
LRR_6 Leucine Rich repeat 0.039 4 23.40 281 296
LRR_8 Leucine rich repeat 5.1E-07 19 27.00 283 343
LRR_4 Leucine Rich repeats (2 copies) 5.7E-07 20 27.00 308 348
LRR_1 Leucine Rich Repeat 0.45 2 20.60 310 326
LRR_6 Leucine Rich repeat 0.15 2 23.40 310 322
LRR_6 Leucine Rich repeat 0.15 2 23.40 333 347
LRR_1 Leucine Rich Repeat 0.004 8 20.60 333 355
LRR_8 Leucine rich repeat 4.1E-06 16 27.00 354 392
LRR_4 Leucine Rich repeats (2 copies) 5.2E-06 17 27.00 356 396
LRR_1 Leucine Rich Repeat 0.024 5 20.60 357 377
LRR_6 Leucine Rich repeat 0.27 1 23.40 357 371
LRR_4 Leucine Rich repeats (2 copies) 3.7E-05 14 27.00 381 417
LRR_1 Leucine Rich Repeat 0.57 1 20.60 382 398
LRR_8 Leucine rich repeat 8.7E-09 25 27.00 399 440
LRR_4 Leucine Rich repeats (2 copies) 0.0002 11 27.00 405 441
LRR_1 Leucine Rich Repeat 0.14 3 20.60 406 424
LRR_4 Leucine Rich repeats (2 copies) 1.4E-06 18 27.00 428 464
LRR_6 Leucine Rich repeat 0.19 2 23.40 428 442
LRR_1 Leucine Rich Repeat 0.15 3 20.60 429 442
LRR_8 Leucine rich repeat 5.9E-08 22 27.00 451 487
LRR_6 Leucine Rich repeat 0.01 6 23.40 452 466
LRR_4 Leucine Rich repeats (2 copies) 1.5E-06 18 27.00 452 492
LRR_1 Leucine Rich Repeat 0.01 7 20.60 453 475
LRR_6 Leucine Rich repeat 0.035 4 23.40 476 491
LRR_1 Leucine Rich Repeat 0.004 8 20.60 477 499
LRR_8 Leucine rich repeat 2.9E-05 13 27.00 497 536
LRR_6 Leucine Rich repeat 0.81 0 23.40 501 508
LRR_4 Leucine Rich repeats (2 copies) 0.0028 8 27.00 501 536
LRR_1 Leucine Rich Repeat 0.76 1 20.60 502 518
LRR_4 Leucine Rich repeats (2 copies) 3.4E-05 14 27.00 524 561
LRR_8 Leucine rich repeat 1.2E-12 37 27.00 524 584
LRR_6 Leucine Rich repeat 0.039 4 23.40 549 563
LRR_1 Leucine Rich Repeat 0.00055 10 20.60 549 571
LRR_1 Leucine Rich Repeat 0.046 5 20.60 574 595
LRR_4 Leucine Rich repeats (2 copies) 1.6E-06 18 27.00 574 608
LRR_6 Leucine Rich repeat 0.019 5 23.40 574 586
LRR_8 Leucine rich repeat 3.4E-09 26 27.00 574 632
LRR_6 Leucine Rich repeat 0.7 0 23.40 595 608
LRR_1 Leucine Rich Repeat 0.034 5 20.60 598 618
LRR_4 Leucine Rich repeats (2 copies) 6E-07 20 27.00 620 657
LRR_6 Leucine Rich repeat 0.014 5 23.40 620 635
LRR_1 Leucine Rich Repeat 0.0013 9 20.60 621 640
LRR_6 Leucine Rich repeat 0.042 4 23.40 643 658
LRR_8 Leucine rich repeat 7.2E-11 31 27.00 645 705
LRR_1 Leucine Rich Repeat 0.0056 7 20.60 646 667
LRR_6 Leucine Rich repeat 0.016 5 23.40 668 683
LRR_1 Leucine Rich Repeat 0.016 6 20.60 669 688
LRR_4 Leucine Rich repeats (2 copies) 6.9E-05 13 27.00 669 705
LRR_6 Leucine Rich repeat 0.13 2 23.40 693 708
LRR_1 Leucine Rich Repeat 0.068 4 20.60 694 714
TMEM154 TMEM154 protein family 7E-05 12 30.30 736 790
Sigma_reg_N Sigma factor regulator N-terminal 2.8E-05 14 26.30 746 778
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 5.6E-37 117 23.10 858 1061
Pkinase Protein kinase domain 2.8E-36 115 20.40 880 1110
Kinase-like Kinase-like 8.6E-06 15 25.00 923 1062
Kdo Lipopolysaccharide kinase (Kdo/WaaP) family 0.00018 10 20.90 942 995
Kdo Lipopolysaccharide kinase (Kdo/WaaP) family 0.69 -1 20.90 1038 1067

1136

LRRNT_2
LRR_6
LRR_4
LRR_1
LRR_8
LRR_6
LRR_4
LRR_1
LRR_6
LRR_8
LRR_1
LRR_4
LRR_6
LRR_1
LRR_1
LRR_8
LRR_4
LRR_6
LRR_1
LRR_6
LRR_8
LRR_4
LRR_1
LRR_6
LRR_6
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
LRR_4
LRR_1
LRR_8
LRR_4
LRR_1
LRR_4
LRR_6
LRR_1
LRR_8
LRR_6
LRR_4
LRR_1
LRR_6
LRR_1
LRR_8
LRR_6
LRR_4
LRR_1
LRR_4
LRR_8
LRR_6
LRR_1
LRR_1
LRR_4
LRR_6
LRR_8
LRR_6
LRR_1
LRR_4
LRR_6
LRR_1
LRR_6
LRR_8
LRR_1
LRR_6
LRR_1
LRR_4
LRR_6
LRR_1
TMEM154
Sigma_reg_N
PK_Tyr_Ser-Thr
Pkinase
Kinase-like
Kdo
Kdo

References:

Kdo
11069912 Purification and characterization of WaaP from Escherichia coli, a lipopolysaccharide kinase essential for outer membrane stability. J Biol Chem 2001;276:5498-5504.
12021457 Lipopolysaccharide phosphorylating enzymes encoded in the genomes of Gram-negative bacteria are related to the eukaryotic protein kinases. Protein Sci 2002;11:1580-1584.
10531340 A Haemophilus influenzae gene that encodes a membrane bound 3-deoxy-D-manno-octulosonic acid (Kdo) kinase. Possible involvement of kdo phosphorylation in bacterial virulence. J Biol Chem 1999;274:31391-31400.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

TMEM154

Kinase-like

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRR_8

LRR_6

Sigma_reg_N

LRR_4

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	1.1E-12	38	20.70	26	65
LRR_6	Leucine Rich repeat	0.17	2	23.40	92	105
LRR_4	Leucine Rich repeats (2 copies)	0.0052	7	27.00	93	129
LRR_1	Leucine Rich Repeat	0.05	4	20.60	94	112
LRR_8	Leucine rich repeat	6.3E-09	25	27.00	94	152
LRR_6	Leucine Rich repeat	0.2	2	23.40	139	155
LRR_4	Leucine Rich repeats (2 copies)	2.5E-05	14	27.00	140	178
LRR_1	Leucine Rich Repeat	0.66	1	20.60	141	157
LRR_6	Leucine Rich repeat	0.058	4	23.40	162	176
LRR_8	Leucine rich repeat	1.1E-09	28	27.00	163	222
LRR_1	Leucine Rich Repeat	0.021	6	20.60	163	185
LRR_4	Leucine Rich repeats (2 copies)	4.5E-08	23	27.00	186	222
LRR_6	Leucine Rich repeat	0.0068	6	23.40	186	201
LRR_1	Leucine Rich Repeat	0.00016	12	20.60	187	209
LRR_1	Leucine Rich Repeat	0.065	4	20.60	211	233
LRR_8	Leucine rich repeat	1.8E-10	30	27.00	211	270
LRR_4	Leucine Rich repeats (2 copies)	5.5E-07	20	27.00	235	270
LRR_6	Leucine Rich repeat	0.034	4	23.40	258	272
LRR_1	Leucine Rich Repeat	0.0096	7	20.60	259	275
LRR_6	Leucine Rich repeat	0.039	4	23.40	281	296
LRR_8	Leucine rich repeat	5.1E-07	19	27.00	283	343
LRR_4	Leucine Rich repeats (2 copies)	5.7E-07	20	27.00	308	348
LRR_1	Leucine Rich Repeat	0.45	2	20.60	310	326
LRR_6	Leucine Rich repeat	0.15	2	23.40	310	322
LRR_6	Leucine Rich repeat	0.15	2	23.40	333	347
LRR_1	Leucine Rich Repeat	0.004	8	20.60	333	355
LRR_8	Leucine rich repeat	4.1E-06	16	27.00	354	392
LRR_4	Leucine Rich repeats (2 copies)	5.2E-06	17	27.00	356	396
LRR_1	Leucine Rich Repeat	0.024	5	20.60	357	377
LRR_6	Leucine Rich repeat	0.27	1	23.40	357	371
LRR_4	Leucine Rich repeats (2 copies)	3.7E-05	14	27.00	381	417
LRR_1	Leucine Rich Repeat	0.57	1	20.60	382	398
LRR_8	Leucine rich repeat	8.7E-09	25	27.00	399	440
LRR_4	Leucine Rich repeats (2 copies)	0.0002	11	27.00	405	441
LRR_1	Leucine Rich Repeat	0.14	3	20.60	406	424
LRR_4	Leucine Rich repeats (2 copies)	1.4E-06	18	27.00	428	464
LRR_6	Leucine Rich repeat	0.19	2	23.40	428	442
LRR_1	Leucine Rich Repeat	0.15	3	20.60	429	442
LRR_8	Leucine rich repeat	5.9E-08	22	27.00	451	487
LRR_6	Leucine Rich repeat	0.01	6	23.40	452	466
LRR_4	Leucine Rich repeats (2 copies)	1.5E-06	18	27.00	452	492
LRR_1	Leucine Rich Repeat	0.01	7	20.60	453	475
LRR_6	Leucine Rich repeat	0.035	4	23.40	476	491
LRR_1	Leucine Rich Repeat	0.004	8	20.60	477	499
LRR_8	Leucine rich repeat	2.9E-05	13	27.00	497	536
LRR_6	Leucine Rich repeat	0.81	0	23.40	501	508
LRR_4	Leucine Rich repeats (2 copies)	0.0028	8	27.00	501	536
LRR_1	Leucine Rich Repeat	0.76	1	20.60	502	518
LRR_4	Leucine Rich repeats (2 copies)	3.4E-05	14	27.00	524	561
LRR_8	Leucine rich repeat	1.2E-12	37	27.00	524	584
LRR_6	Leucine Rich repeat	0.039	4	23.40	549	563
LRR_1	Leucine Rich Repeat	0.00055	10	20.60	549	571
LRR_1	Leucine Rich Repeat	0.046	5	20.60	574	595
LRR_4	Leucine Rich repeats (2 copies)	1.6E-06	18	27.00	574	608
LRR_6	Leucine Rich repeat	0.019	5	23.40	574	586
LRR_8	Leucine rich repeat	3.4E-09	26	27.00	574	632
LRR_6	Leucine Rich repeat	0.7	0	23.40	595	608
LRR_1	Leucine Rich Repeat	0.034	5	20.60	598	618
LRR_4	Leucine Rich repeats (2 copies)	6E-07	20	27.00	620	657
LRR_6	Leucine Rich repeat	0.014	5	23.40	620	635
LRR_1	Leucine Rich Repeat	0.0013	9	20.60	621	640
LRR_6	Leucine Rich repeat	0.042	4	23.40	643	658
LRR_8	Leucine rich repeat	7.2E-11	31	27.00	645	705
LRR_1	Leucine Rich Repeat	0.0056	7	20.60	646	667
LRR_6	Leucine Rich repeat	0.016	5	23.40	668	683
LRR_1	Leucine Rich Repeat	0.016	6	20.60	669	688
LRR_4	Leucine Rich repeats (2 copies)	6.9E-05	13	27.00	669	705
LRR_6	Leucine Rich repeat	0.13	2	23.40	693	708
LRR_1	Leucine Rich Repeat	0.068	4	20.60	694	714
TMEM154	TMEM154 protein family	7E-05	12	30.30	736	790
Sigma_reg_N	Sigma factor regulator N-terminal	2.8E-05	14	26.30	746	778
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	5.6E-37	117	23.10	858	1061
Pkinase	Protein kinase domain	2.8E-36	115	20.40	880	1110
Kinase-like	Kinase-like	8.6E-06	15	25.00	923	1062
Kdo	Lipopolysaccharide kinase (Kdo/WaaP) family	0.00018	10	20.90	942	995
Kdo	Lipopolysaccharide kinase (Kdo/WaaP) family	0.69	-1	20.90	1038	1067