AT4G36390.1 :
Domain
Description
Evalue
Bits
GA
Start
End
UPF0004
Uncharacterized protein family UPF0004
8.1E-34
104
21.30
130
242
IKI3
IKI3 family
6.5E-05
9
19.30
182
208
Radical_SAM
Radical SAM superfamily
0
133
29.30
290
484
TRAM
TRAM domain
1.9E-25
77
20.80
538
617
TRAM_2
TRAM domain
0.00011
11
27.00
579
616
640
UPF0004
IKI3
Radical_SAM
TRAM
TRAM_2
References:
IKI3
10024884
Elongator, a multisubunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation.
Mol Cell 1999;3:109-118.
TRAM_2
Radical_SAM
11222759
Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods.
Nucleic Acids Res 2001;29:1097-1106.
17335281
Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to catalyze in vitro sulfatase post-translational modification.
J Am Chem Soc. 2007;129:3462-3463.
16766528
A new type of bacterial sulfatase reveals a novel maturation pathway in prokaryotes.
J Biol Chem. 2006;281:22464-22470.
UPF0004
11313137
TRAM, a predicted RNA-binding domain, common to tRNA uracil methylation and adenine thiolation enzymes.
FEMS Microbiol Lett 2001;197:215-221.
11882645
Enzymatic modification of tRNAs: MiaB is an iron-sulfur protein.
J Biol Chem 2002;277:13367-13370.
TRAM
11313137
TRAM, a predicted RNA-binding domain, common to tRNA uracil methylation and adenine thiolation enzymes.
FEMS Microbiol Lett 2001;197:215-221.