c2pfam

AT4G37010.1 :

Domain Description Evalue Bits GA Start End
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 0.00055 11 21.40 23 86
EF-hand_4 Cytoskeletal-regulatory complex EF hand 1.4E-07 22 21.30 25 71
EF-hand_7 EF-hand domain pair 1.4E-17 54 30.00 26 88
EF-hand_1 EF hand 9.6E-11 31 25.40 27 55
EF-hand_6 EF-hand domain 1.3E-09 28 25.00 27 56
EF-hand_8 EF-hand domain pair 1.5E-05 15 28.00 27 48
EF-hand_5 EF hand 5.4E-08 23 25.90 28 49
EF-hand_9 EF-hand domain 7.6E-08 23 37.00 31 91
EF-hand_14 EF-hand domain 4.2E-05 14 23.70 31 79
Caleosin Caleosin related protein 0.0093 6 20.60 32 59
Dockerin_1 Dockerin type I repeat 0.013 6 20.50 35 80
EF-hand_8 EF-hand domain pair 4.8E-12 36 28.00 40 89
TerB Tellurite resistance protein TerB 6E-06 17 22.80 41 106
UPF0154 Uncharacterised protein family (UPF0154) 0.037 4 20.90 44 72
EF-hand_10 EF hand 0.0008 10 27.00 46 87
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.00083 10 21.30 59 92
Caleosin Caleosin related protein 0.012 6 20.60 60 98
EF-hand_5 EF hand 5.7E-07 19 25.90 64 87
EF-hand_6 EF-hand domain 1.7E-06 18 25.00 64 90
EF-hand_1 EF hand 6.1E-11 32 25.40 64 90
DUF5580 Family of unknown function (DUF5580) 5.9E-08 22 83.40 68 165
Vps23_core Vps23 core domain 0.11 3 20.60 75 87
PB1 PB1 domain 0.069 4 20.80 78 95
Vps23_core Vps23 core domain 0.49 1 20.60 95 116
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 2.5E-06 18 21.40 99 159
EF-hand_7 EF-hand domain pair 2.3E-17 54 30.00 100 162
EF-hand_1 EF hand 1.8E-07 21 25.40 100 127
EF-hand_8 EF-hand domain pair 0.0018 8 28.00 100 117
EF-hand_6 EF-hand domain 2.5E-08 24 25.00 101 128
EF-hand_5 EF hand 1.8E-05 15 25.90 103 119
Caleosin Caleosin related protein 0.062 4 20.60 103 131
EF-hand_9 EF-hand domain 1.2E-06 19 37.00 104 163
EF-hand_14 EF-hand domain 0.15 3 23.70 105 149
Dockerin_1 Dockerin type I repeat 3.9E-07 21 20.50 109 161
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.00014 12 21.30 112 162
UPF0154 Uncharacterised protein family (UPF0154) 0.012 6 20.90 112 142
EF-hand_8 EF-hand domain pair 5.1E-13 39 28.00 113 163
TerB Tellurite resistance protein TerB 0.0036 8 22.80 114 163
Phage_TAC_12 Phage tail assembly chaperone protein, TAC 0.00029 12 26.20 128 163
Caleosin Caleosin related protein 0.0067 7 20.60 131 163
PB1 PB1 domain 0.0076 7 20.80 133 154
EF-hand_1 EF hand 3.1E-11 33 25.40 136 163
EF-hand_5 EF hand 9.5E-07 19 25.90 138 161
EF-hand_10 EF hand 0.083 3 27.00 138 161
EF-hand_6 EF-hand domain 1.6E-06 18 25.00 142 163
Vps23_core Vps23 core domain 0.02 5 20.60 148 164

167

SPARC_Ca_bdg
EF-hand_4
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
EF-hand_14
Caleosin
Dockerin_1
EF-hand_8
TerB
UPF0154
EF-hand_10
EF-hand_4
Caleosin
EF-hand_5
EF-hand_6
EF-hand_1
DUF5580
Vps23_core
PB1
Vps23_core
SPARC_Ca_bdg
EF-hand_7
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_5
Caleosin
EF-hand_9
EF-hand_14
Dockerin_1
EF-hand_4
UPF0154
EF-hand_8
TerB
Phage_TAC_12
Caleosin
PB1
EF-hand_1
EF-hand_5
EF-hand_10
EF-hand_6
Vps23_core

References:

DUF5580

TerB
3049247 The nucleotide sequence of a plasmid determinant for resistance to tellurium anions. Gene 1988;66:245-258.
10069007 In vivo and in vitro cloning and phenotype characterization of tellurite resistance determinant conferred by plasmid pTE53 of a clinical isolate of Escherichia coli. Folia Microbiol (Praha) 1998;43:589-599.

EF-hand_9

SPARC_Ca_bdg
16121393 The C-terminal Ca2+-binding domain of SPARC confers anti-spreading activity to human urothelial cells. J Cell Physiol. 2006;206:211-220.

EF-hand_7

EF-hand_6

EF-hand_5

EF-hand_4

Vps23_core
16615893 ESCRT-I core and ESCRT-II GLUE domain structures reveal role for GLUE in linking to ESCRT-I and membranes. Cell. 2006;125:99-111.

EF-hand_14

EF-hand_10

EF-hand_1

EF-hand_8

Caleosin
11171180 New insights into the mechanisms of lipid-body biogenesis in plants and other organisms. Biochem Soc Trans 2000;28:710-711.

Dockerin_1
10390637 The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides [In Process Citation] Trends Microbiol 1999;7:275-281.
10898940 Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy. Arch Biochem Biophys 2000;379:237-244.

UPF0154

PB1
8931154 Novel domains in NADPH oxidase subunits, sorting nexins, and PtdIns 3-kinases: binding partners of SH3 domains? Protein Sci 1996;5:2353-2357.
7759517 Components of a new human protein kinase signal transduction pathway. J Biol Chem 1995;270:12665-12669.
7499418 Isolation of MEK5 and differential expression of alternatively spliced forms. J Biol Chem 1995;270:28897-28902.

Phage_TAC_12

Domain	Description	Evalue	Bits	GA	Start	End
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	0.00055	11	21.40	23	86
EF-hand_4	Cytoskeletal-regulatory complex EF hand	1.4E-07	22	21.30	25	71
EF-hand_7	EF-hand domain pair	1.4E-17	54	30.00	26	88
EF-hand_1	EF hand	9.6E-11	31	25.40	27	55
EF-hand_6	EF-hand domain	1.3E-09	28	25.00	27	56
EF-hand_8	EF-hand domain pair	1.5E-05	15	28.00	27	48
EF-hand_5	EF hand	5.4E-08	23	25.90	28	49
EF-hand_9	EF-hand domain	7.6E-08	23	37.00	31	91
EF-hand_14	EF-hand domain	4.2E-05	14	23.70	31	79
Caleosin	Caleosin related protein	0.0093	6	20.60	32	59
Dockerin_1	Dockerin type I repeat	0.013	6	20.50	35	80
EF-hand_8	EF-hand domain pair	4.8E-12	36	28.00	40	89
TerB	Tellurite resistance protein TerB	6E-06	17	22.80	41	106
UPF0154	Uncharacterised protein family (UPF0154)	0.037	4	20.90	44	72
EF-hand_10	EF hand	0.0008	10	27.00	46	87
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.00083	10	21.30	59	92
Caleosin	Caleosin related protein	0.012	6	20.60	60	98
EF-hand_5	EF hand	5.7E-07	19	25.90	64	87
EF-hand_6	EF-hand domain	1.7E-06	18	25.00	64	90
EF-hand_1	EF hand	6.1E-11	32	25.40	64	90
DUF5580	Family of unknown function (DUF5580)	5.9E-08	22	83.40	68	165
Vps23_core	Vps23 core domain	0.11	3	20.60	75	87
PB1	PB1 domain	0.069	4	20.80	78	95
Vps23_core	Vps23 core domain	0.49	1	20.60	95	116
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	2.5E-06	18	21.40	99	159
EF-hand_7	EF-hand domain pair	2.3E-17	54	30.00	100	162
EF-hand_1	EF hand	1.8E-07	21	25.40	100	127
EF-hand_8	EF-hand domain pair	0.0018	8	28.00	100	117
EF-hand_6	EF-hand domain	2.5E-08	24	25.00	101	128
EF-hand_5	EF hand	1.8E-05	15	25.90	103	119
Caleosin	Caleosin related protein	0.062	4	20.60	103	131
EF-hand_9	EF-hand domain	1.2E-06	19	37.00	104	163
EF-hand_14	EF-hand domain	0.15	3	23.70	105	149
Dockerin_1	Dockerin type I repeat	3.9E-07	21	20.50	109	161
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.00014	12	21.30	112	162
UPF0154	Uncharacterised protein family (UPF0154)	0.012	6	20.90	112	142
EF-hand_8	EF-hand domain pair	5.1E-13	39	28.00	113	163
TerB	Tellurite resistance protein TerB	0.0036	8	22.80	114	163
Phage_TAC_12	Phage tail assembly chaperone protein, TAC	0.00029	12	26.20	128	163
Caleosin	Caleosin related protein	0.0067	7	20.60	131	163
PB1	PB1 domain	0.0076	7	20.80	133	154
EF-hand_1	EF hand	3.1E-11	33	25.40	136	163
EF-hand_5	EF hand	9.5E-07	19	25.90	138	161
EF-hand_10	EF hand	0.083	3	27.00	138	161
EF-hand_6	EF-hand domain	1.6E-06	18	25.00	142	163
Vps23_core	Vps23 core domain	0.02	5	20.60	148	164