c2pfam

AT4G39540.1 :

Domain Description Evalue Bits GA Start End
AAA_5 AAA domain (dynein-related subfamily) 0.48 0 20.80 32 53
TsaE Threonylcarbamoyl adenosine biosynthesis protein TsaE 6.8E-06 16 26.60 89 124
AAA_16 AAA ATPase domain 1.7E-05 15 32.60 97 166
AAA_22 AAA domain 1.6E-05 15 27.00 98 168
AAA_5 AAA domain (dynein-related subfamily) 0.00029 11 20.80 101 149
AAA ATPase family associated with various cellular activities (AAA) 5.3E-06 17 20.80 101 130
AAA_33 AAA domain 1.3E-07 22 27.00 102 143
CoaE Dephospho-CoA kinase 1.2E-07 21 20.80 103 157
AAA_18 AAA domain 1E-10 32 29.40 103 214
AAA_17 AAA domain 5.2E-06 17 27.00 104 152
dNK Deoxynucleoside kinase 4.7E-05 13 20.70 105 128
Cytidylate_kin Cytidylate kinase 5.3E-05 13 20.40 105 130
Cytidylate_kin2 Cytidylate kinase-like family 1.2E-07 22 28.00 106 157
SKI Shikimate kinase 0 157 20.90 107 262
dNK Deoxynucleoside kinase 0.45 0 20.70 192 211

300

AAA_5
TsaE
AAA_16
AAA_22
AAA_5
AAA
AAA_33
CoaE
AAA_18
AAA_17
dNK
Cytidylate_kin
Cytidylate_kin2
SKI
dNK

References:

AAA_17

AAA_16

AAA_33

TsaE

SKI

Cytidylate_kin
9862805 Structures of escherichia coli CMP kinase alone and in complex with CDP: a new fold of the nucleoside monophosphate binding domain and insights into cytosine nucleotide specificity. Structure 1998;6:1517-1527.

AAA_5
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

CoaE

dNK
9079672 Cloning of the cDNA and chromosome localization of the gene for human thymidine kinase 2. J Biol Chem 1997;272:8454-8458.
8692979 Cloning and expression of human deoxyguanosine kinase cDNA. Proc Natl Acad Sci U S A 1996;93:7258-7262.

AAA
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

Cytidylate_kin2

AAA_22

AAA_18

Domain	Description	Evalue	Bits	GA	Start	End
AAA_5	AAA domain (dynein-related subfamily)	0.48	0	20.80	32	53
TsaE	Threonylcarbamoyl adenosine biosynthesis protein TsaE	6.8E-06	16	26.60	89	124
AAA_16	AAA ATPase domain	1.7E-05	15	32.60	97	166
AAA_22	AAA domain	1.6E-05	15	27.00	98	168
AAA_5	AAA domain (dynein-related subfamily)	0.00029	11	20.80	101	149
AAA	ATPase family associated with various cellular activities (AAA)	5.3E-06	17	20.80	101	130
AAA_33	AAA domain	1.3E-07	22	27.00	102	143
CoaE	Dephospho-CoA kinase	1.2E-07	21	20.80	103	157
AAA_18	AAA domain	1E-10	32	29.40	103	214
AAA_17	AAA domain	5.2E-06	17	27.00	104	152
dNK	Deoxynucleoside kinase	4.7E-05	13	20.70	105	128
Cytidylate_kin	Cytidylate kinase	5.3E-05	13	20.40	105	130
Cytidylate_kin2	Cytidylate kinase-like family	1.2E-07	22	28.00	106	157
SKI	Shikimate kinase	0	157	20.90	107	262
dNK	Deoxynucleoside kinase	0.45	0	20.70	192	211