c2pfam

AT4G39870.1 :

Domain Description Evalue Bits GA Start End
Tim54 Inner membrane protein import complex subunit Tim54 0.00015 10 24.40 14 110
VIR_N Virilizer, N-terminal 6.6E-06 15 27.70 25 127
PI3K_1B_p101 Phosphoinositide 3-kinase gamma adapter protein p101 subunit 0.0004 8 18.20 43 180
RR_TM4-6 Ryanodine Receptor TM 4-6 0.00015 11 25.10 50 149
SpoIIIAH SpoIIIAH-like protein 0.00036 10 30.60 53 142
NOA36 NOA36 protein 0.0016 7 25.00 63 115
DUF4611 Domain of unknown function (DUF4611) 9.1E-05 12 32.10 71 125
eIF-3c_N Eukaryotic translation initiation factor 3 subunit 8 N-terminus 0.0015 6 20.70 87 194
DNA_pol_phi DNA polymerase phi 0.002 6 19.50 88 115
TLD TLD 3.8E-34 107 21.50 234 370

394

Tim54
VIR_N
PI3K_1B_p101
RR_TM4-6
SpoIIIAH
NOA36
DUF4611
eIF-3c_N
DNA_pol_phi
TLD

References:

NOA36

SpoIIIAH

DUF4611

DNA_pol_phi
12093911 The fifth essential DNA polymerase phi in Saccharomyces cerevisiae is localized to the nucleolus and plays an important role in synthesis of rRNA. Proc Natl Acad Sci U S A 2002;99:9133-9138.

Tim54
9412462 The Tim54p-Tim22p complex mediates insertion of proteins into the mitochondrial inner membrane. J Cell Biol. 1997;139:1663-1675.

TLD
11779830 Systematic identification of novel protein domain families associated with nuclear functions. Genome Res 2002;12:47-56.

eIF-3c_N
8995409 Conservation and diversity of eukaryotic translation initiation factor eIF3. J Biol Chem 1997;272:1101-1109.
12411506 Direct eIF2-eIF3 contact in the multifactor complex is important for translation initiation in vivo. EMBO J 2002;21:5886-5898.

PI3K_1B_p101
11395417 Synthesis and function of 3-phosphorylated inositol lipids. Annu Rev Biochem. 2001;70:535-602.

RR_TM4-6

VIR_N

Domain	Description	Evalue	Bits	GA	Start	End
Tim54	Inner membrane protein import complex subunit Tim54	0.00015	10	24.40	14	110
VIR_N	Virilizer, N-terminal	6.6E-06	15	27.70	25	127
PI3K_1B_p101	Phosphoinositide 3-kinase gamma adapter protein p101 subunit	0.0004	8	18.20	43	180
RR_TM4-6	Ryanodine Receptor TM 4-6	0.00015	11	25.10	50	149
SpoIIIAH	SpoIIIAH-like protein	0.00036	10	30.60	53	142
NOA36	NOA36 protein	0.0016	7	25.00	63	115
DUF4611	Domain of unknown function (DUF4611)	9.1E-05	12	32.10	71	125
eIF-3c_N	Eukaryotic translation initiation factor 3 subunit 8 N-terminus	0.0015	6	20.70	87	194
DNA_pol_phi	DNA polymerase phi	0.002	6	19.50	88	115
TLD	TLD	3.8E-34	107	21.50	234	370