c2pfam

AT1G01200.1 :

Domain Description Evalue Bits GA Start End
Arf ADP-ribosylation factor family 8.8E-17 50 20.30 29 189
MMR_HSR1 GTPase of unknown function 1.5E-07 21 24.50 30 127
PduV-EutP Ethanolamine utilisation - propanediol utilisation 1.8E-06 17 20.50 30 82
SRPRB Signal recognition particle receptor beta subunit 1.1E-06 18 20.50 30 177
Ras Ras family 0 190 20.80 30 190
Roc Ras of Complex, Roc, domain of DAPkinase 2.5E-36 114 27.00 30 145
TniB Bacterial TniB protein 4.3E-05 12 20.10 30 54
AAA_16 AAA ATPase domain 2.3E-05 14 32.60 31 170
GTP_EFTU Elongation factor Tu GTP binding domain 9.2E-05 11 20.20 66 187

237

Arf
MMR_HSR1
PduV-EutP
SRPRB
Ras
Roc
TniB
AAA_16
GTP_EFTU

References:

MMR_HSR1
8180467 Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. Mamm Genome 1994;5:100-105.

AAA_16

Ras
11387043 The Rab GTPase family. Genome Biol 2001;2:REVIEWS3007.

TniB
8195081 Transposon Tn5090 of plasmid R751, which carries an integron, is related to Tn7, Mu, and the retroelements. J Bacteriol 1994;176:3257-3268.
8594337 Four genes, two ends, and a res region are involved in transposition of Tn5053: a paradigm for a novel family of transposons carrying either a mer operon or an integron. Mol Microbiol 1995;17:1189-1200.

SRPRB
7844142 The beta subunit of the signal recognition particle receptor is a transmembrane GTPase that anchors the alpha subunit, a peripheral membrane GTPase, to the endoplasmic reticulum membrane. J Cell Biol. 1995;128:273-282.

GTP_EFTU
9311785 Visualization of elongation factor Tu on the Escherichia coli ribosome. Nature 1997;389:403-406.

PduV-EutP
15516577 Evidence that a B12-adenosyl transferase is encoded within the ethanolamine operon of Salmonella enterica. J Bacteriol. 2004;186:7635-7644.
10464203 The 17-gene ethanolamine (eut) operon of Salmonella typhimurium encodes five homologues of carboxysome shell proteins. J Bacteriol 1999;181:5317-5329.
10498708 The propanediol utilization (pdu) operon of Salmonella enterica serovar Typhimurium LT2 includes genes necessary for formation of polyhedral organelles involved in coenzyme B(12)-dependent 1, 2-propanediol degradation. J Bacteriol. 1999;181:5967-5975.

Arf
7990966 Structure of the human ADP-ribosylation factor 1 complexed with GDP. Nature 1994;372:704-708.
7759471 Structure and function of ARF proteins: Activators of cholera toxin and critical components of intracellular vesicular transport processes. J. Biol. Chem. 1995;270:12327-12330.
7770914 Arf proteins: the membrane traffic police? Trends Biochem Sci 1995;20:147-150.
1899243 Human ADP-ribosylation factors. A functionally conserved family of GTP-binding proteins. J Biol Chem 1991;266:2606-2614.

Roc

Domain	Description	Evalue	Bits	GA	Start	End
Arf	ADP-ribosylation factor family	8.8E-17	50	20.30	29	189
MMR_HSR1	GTPase of unknown function	1.5E-07	21	24.50	30	127
PduV-EutP	Ethanolamine utilisation - propanediol utilisation	1.8E-06	17	20.50	30	82
SRPRB	Signal recognition particle receptor beta subunit	1.1E-06	18	20.50	30	177
Ras	Ras family	0	190	20.80	30	190
Roc	Ras of Complex, Roc, domain of DAPkinase	2.5E-36	114	27.00	30	145
TniB	Bacterial TniB protein	4.3E-05	12	20.10	30	54
AAA_16	AAA ATPase domain	2.3E-05	14	32.60	31	170
GTP_EFTU	Elongation factor Tu GTP binding domain	9.2E-05	11	20.20	66	187