c2pfam

AT5G01520.1 :

Domain Description Evalue Bits GA Start End
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 0.25 2 21.40 139 149
zf-RING_6 zf-RING of BARD1-type protein 0.00035 11 35.00 140 183
IBR IBR domain 0.0002 12 23.60 141 180
zf-RING_14 RING/Ubox like zinc-binding domain 0.00043 11 26.60 142 173
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 0.00017 12 27.30 143 181
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 5.9E-12 36 27.00 143 189
zf-RING_2 Ring finger domain 6.1E-11 33 27.30 145 184
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 8.4E-08 22 27.00 145 183
zf-RING_5 zinc-RING finger domain 1.2E-07 22 27.90 145 184
zf-rbx1 RING-H2 zinc finger domain 2.8E-05 15 31.00 145 184
zf-RING_10 zinc RING finger of MSL2 0.00029 11 31.00 146 185
zf-C3HC4_4 zinc finger of C3HC4-type, RING 0.002 9 30.00 146 183
zf-P11 P-11 zinc finger 0.0056 7 24.90 146 185
zf-RING_UBOX RING-type zinc-finger 2.8E-06 18 25.20 146 181
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 4.8E-10 30 21.00 146 183
Prok-RING_4 Prokaryotic RING finger family 4 4.4E-09 27 27.00 146 187
zf-RING_4 RING/Ubox like zinc-binding domain 1.6E-05 15 27.00 150 185
zf-C3HC4_5 Zinc finger, C3HC4 type (RING finger) 0.03 5 27.00 156 182
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 0.00035 11 21.40 156 187

242

zf-ANAPC11
zf-RING_6
IBR
zf-RING_14
Zn_ribbon_17
zf-C3HC4_3
zf-RING_2
zf-C3HC4_2
zf-RING_5
zf-rbx1
zf-RING_10
zf-C3HC4_4
zf-P11
zf-RING_UBOX
zf-C3HC4
Prok-RING_4
zf-RING_4
zf-C3HC4_5
zf-ANAPC11

References:

Zn_ribbon_17

IBR
10366851 A novel transactivation domain in parkin. Trends Biochem Sci 1999;24:229-231.
10422847 TRIADs: a new class of proteins with a novel cysteine-rich signature. Protein Sci 1999;8:1557-1561.
15152079 Parkin and relatives: the RBR family of ubiquitin ligases. Physiol Genomics 2004;17:253-263.
12446796 Comparative genomics of the RBR family, including the Parkinson's disease-related gene parkin and the genes of the ariadne subfamily. Mol Biol Evol 2002;19:2039-2050.

Prok-RING_4

zf-RING_UBOX

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

zf-ANAPC11

zf-C3HC4_2

zf-rbx1

zf-RING_6

zf-RING_5

zf-RING_4

zf-RING_2

zf-RING_14

zf-C3HC4_5

zf-RING_10

zf-C3HC4_3

zf-C3HC4_4

zf-P11

Domain	Description	Evalue	Bits	GA	Start	End
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	0.25	2	21.40	139	149
zf-RING_6	zf-RING of BARD1-type protein	0.00035	11	35.00	140	183
IBR	IBR domain	0.0002	12	23.60	141	180
zf-RING_14	RING/Ubox like zinc-binding domain	0.00043	11	26.60	142	173
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	0.00017	12	27.30	143	181
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	5.9E-12	36	27.00	143	189
zf-RING_2	Ring finger domain	6.1E-11	33	27.30	145	184
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	8.4E-08	22	27.00	145	183
zf-RING_5	zinc-RING finger domain	1.2E-07	22	27.90	145	184
zf-rbx1	RING-H2 zinc finger domain	2.8E-05	15	31.00	145	184
zf-RING_10	zinc RING finger of MSL2	0.00029	11	31.00	146	185
zf-C3HC4_4	zinc finger of C3HC4-type, RING	0.002	9	30.00	146	183
zf-P11	P-11 zinc finger	0.0056	7	24.90	146	185
zf-RING_UBOX	RING-type zinc-finger	2.8E-06	18	25.20	146	181
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	4.8E-10	30	21.00	146	183
Prok-RING_4	Prokaryotic RING finger family 4	4.4E-09	27	27.00	146	187
zf-RING_4	RING/Ubox like zinc-binding domain	1.6E-05	15	27.00	150	185
zf-C3HC4_5	Zinc finger, C3HC4 type (RING finger)	0.03	5	27.00	156	182
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	0.00035	11	21.40	156	187