c2pfam

AT5G01820.1 :

Domain Description Evalue Bits GA Start End
Pkinase Protein kinase domain 0 238 20.40 22 276
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 126 23.10 24 272
ABC1 ABC1 family 6.2E-05 12 20.60 28 77
APH Phosphotransferase enzyme family 0.079 2 22.40 56 109
Kdo Lipopolysaccharide kinase (Kdo/WaaP) family 4.1E-05 12 20.90 115 156
Kinase-like Kinase-like 5.9E-10 28 25.00 118 263
APH Phosphotransferase enzyme family 0.00028 10 22.40 137 154
Kdo Lipopolysaccharide kinase (Kdo/WaaP) family 0.3 -1 20.90 239 259
NAF NAF domain 2.9E-22 68 25.00 309 366
Kdo Lipopolysaccharide kinase (Kdo/WaaP) family 0.96 -2 20.90 342 365

442

Pkinase
PK_Tyr_Ser-Thr
ABC1
APH
Kdo
Kinase-like
APH
Kdo
NAF
Kdo

References:

Kdo
11069912 Purification and characterization of WaaP from Escherichia coli, a lipopolysaccharide kinase essential for outer membrane stability. J Biol Chem 2001;276:5498-5504.
12021457 Lipopolysaccharide phosphorylating enzymes encoded in the genomes of Gram-negative bacteria are related to the eukaryotic protein kinases. Protein Sci 2002;11:1580-1584.
10531340 A Haemophilus influenzae gene that encodes a membrane bound 3-deoxy-D-manno-octulosonic acid (Kdo) kinase. Possible involvement of kdo phosphorylation in bacterial virulence. J Biol Chem 1999;274:31391-31400.

ABC1
1648478 ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex. EMBO J 1991;10:2023-2031.
9422602 Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J Bacteriol 1998;180:128-135.

Kinase-like

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

NAF
11230129 The NAF domain defines a novel protein-protein interaction module conserved in Ca2+-regulated kinases. EMBO J 2001;20:1051-1063.

PK_Tyr_Ser-Thr

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

Domain	Description	Evalue	Bits	GA	Start	End
Pkinase	Protein kinase domain	0	238	20.40	22	276
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	126	23.10	24	272
ABC1	ABC1 family	6.2E-05	12	20.60	28	77
APH	Phosphotransferase enzyme family	0.079	2	22.40	56	109
Kdo	Lipopolysaccharide kinase (Kdo/WaaP) family	4.1E-05	12	20.90	115	156
Kinase-like	Kinase-like	5.9E-10	28	25.00	118	263
APH	Phosphotransferase enzyme family	0.00028	10	22.40	137	154
Kdo	Lipopolysaccharide kinase (Kdo/WaaP) family	0.3	-1	20.90	239	259
NAF	NAF domain	2.9E-22	68	25.00	309	366
Kdo	Lipopolysaccharide kinase (Kdo/WaaP) family	0.96	-2	20.90	342	365