c2pfam

AT5G01890.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 1.5E-15 47 20.70 25 64
DUF3809 Protein of unknown function (DUF3809) 0.009 6 25.00 82 119
LRR_6 Leucine Rich repeat 0.093 3 23.40 92 106
LRR_8 Leucine rich repeat 1.9E-05 14 27.00 94 129
LRR_4 Leucine Rich repeats (2 copies) 3E-06 17 27.00 94 129
LRR_1 Leucine Rich Repeat 0.011 7 20.60 94 115
LRR_1 Leucine Rich Repeat 0.021 6 20.60 117 136
LRR_6 Leucine Rich repeat 0.19 2 23.40 117 130
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.00018 11 27.70 130 175
LRR_8 Leucine rich repeat 2.9E-10 30 27.00 132 177
LRR_4 Leucine Rich repeats (2 copies) 7.5E-08 23 27.00 142 177
LRR_1 Leucine Rich Repeat 0.072 4 20.60 142 162
LRR_6 Leucine Rich repeat 0.17 2 23.40 142 155
LRR_6 Leucine Rich repeat 3.1E-05 14 23.40 163 179
LRR_1 Leucine Rich Repeat 0.00019 12 20.60 167 188
LRR_8 Leucine rich repeat 6.8E-08 22 27.00 188 223
LRR_4 Leucine Rich repeats (2 copies) 3.1E-08 24 27.00 189 229
LRR_1 Leucine Rich Repeat 0.0015 9 20.60 190 212
LRR_6 Leucine Rich repeat 0.052 4 23.40 190 199
LRR_6 Leucine Rich repeat 0.33 1 23.40 215 227
LRR_2 Leucine Rich Repeat 0.84 0 20.90 215 228
LRR_1 Leucine Rich Repeat 0.0064 7 20.60 215 234
LRR_4 Leucine Rich repeats (2 copies) 2.8E-06 18 27.00 215 253
LRR_8 Leucine rich repeat 5.7E-06 16 27.00 235 273
Suppressor_P21 RNA silencing suppressor P21 0.016 5 28.90 235 251
LRR_6 Leucine Rich repeat 0.013 6 23.40 236 247
LRR_2 Leucine Rich Repeat 0.44 1 20.90 238 250
LRR_1 Leucine Rich Repeat 0.0056 7 20.60 238 260
LRR_1 Leucine Rich Repeat 0.44 2 20.60 266 281
LRR_8 Leucine rich repeat 3.7E-08 23 27.00 286 344
LRR_6 Leucine Rich repeat 0.043 4 23.40 286 299
LRR_4 Leucine Rich repeats (2 copies) 1.3E-05 15 27.00 287 323
LRR_1 Leucine Rich Repeat 0.034 5 20.60 287 308
DUF3809 Protein of unknown function (DUF3809) 0.03 4 25.00 295 327
LRR_1 Leucine Rich Repeat 0.16 3 20.60 311 332
LRR_4 Leucine Rich repeats (2 copies) 0.00091 10 27.00 311 347
Suppressor_P21 RNA silencing suppressor P21 0.036 4 28.90 329 347
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.16 2 27.70 329 343
LRR_6 Leucine Rich repeat 0.5 1 23.40 331 347
LRR_1 Leucine Rich Repeat 0.44 2 20.60 334 347
LRR_8 Leucine rich repeat 5.4E-05 13 27.00 384 421
LRR_4 Leucine Rich repeats (2 copies) 7.2E-07 19 27.00 386 425
LRR_1 Leucine Rich Repeat 0.0054 7 20.60 387 404
LRR_6 Leucine Rich repeat 0.0038 7 23.40 387 400
LRR_2 Leucine Rich Repeat 0.34 2 20.90 387 400
LRR_8 Leucine rich repeat 3.7E-06 16 27.00 431 469
LRR_4 Leucine Rich repeats (2 copies) 0.0006 10 27.00 436 469
LRR_1 Leucine Rich Repeat 0.28 2 20.60 436 452
LRR_6 Leucine Rich repeat 0.55 1 23.40 437 446
LRR_2 Leucine Rich Repeat 0.011 6 20.90 458 471
LRR_1 Leucine Rich Repeat 0.12 3 20.60 458 480
LRR_4 Leucine Rich repeats (2 copies) 2.9E-05 14 27.00 458 495
LRR_8 Leucine rich repeat 2.1E-12 36 27.00 458 517
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.07 3 27.70 478 515
LRR_6 Leucine Rich repeat 0.62 0 23.40 480 495
LRR_8 Leucine rich repeat 1.2E-11 34 27.00 482 541
LRR_1 Leucine Rich Repeat 0.22 3 20.60 483 504
LRR_6 Leucine Rich repeat 0.017 5 23.40 504 519
LRR_1 Leucine Rich Repeat 0.00074 10 20.60 506 528
LRR_4 Leucine Rich repeats (2 copies) 1.2E-06 19 27.00 506 542
LRR_8 Leucine rich repeat 0.0015 8 27.00 525 549
LRR_6 Leucine Rich repeat 0.00053 10 23.40 528 544
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 146 23.10 688 956
Pkinase Protein kinase domain 0 141 20.40 688 897
Kinase-like Kinase-like 0.00017 11 25.00 787 890

967

LRRNT_2
DUF3809
LRR_6
LRR_8
LRR_4
LRR_1
LRR_1
LRR_6
LRR_5
LRR_8
LRR_4
LRR_1
LRR_6
LRR_6
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
LRR_6
LRR_2
LRR_1
LRR_4
LRR_8
Suppressor_P21
LRR_6
LRR_2
LRR_1
LRR_1
LRR_8
LRR_6
LRR_4
LRR_1
DUF3809
LRR_1
LRR_4
Suppressor_P21
LRR_5
LRR_6
LRR_1
LRR_8
LRR_4
LRR_1
LRR_6
LRR_2
LRR_8
LRR_4
LRR_1
LRR_6
LRR_2
LRR_1
LRR_4
LRR_8
LRR_5
LRR_6
LRR_8
LRR_1
LRR_6
LRR_1
LRR_4
LRR_8
LRR_6
PK_Tyr_Ser-Thr
Pkinase
Kinase-like

References:

Suppressor_P21
16154094 RNA silencing suppressor p21 of Beet yellows virus forms an RNA binding octameric ring structure. Structure. 2005;13:1375-1384.

LRR_8

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

LRR_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

Kinase-like

LRR_6

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

DUF3809

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_5

LRR_4

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	1.5E-15	47	20.70	25	64
DUF3809	Protein of unknown function (DUF3809)	0.009	6	25.00	82	119
LRR_6	Leucine Rich repeat	0.093	3	23.40	92	106
LRR_8	Leucine rich repeat	1.9E-05	14	27.00	94	129
LRR_4	Leucine Rich repeats (2 copies)	3E-06	17	27.00	94	129
LRR_1	Leucine Rich Repeat	0.011	7	20.60	94	115
LRR_1	Leucine Rich Repeat	0.021	6	20.60	117	136
LRR_6	Leucine Rich repeat	0.19	2	23.40	117	130
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.00018	11	27.70	130	175
LRR_8	Leucine rich repeat	2.9E-10	30	27.00	132	177
LRR_4	Leucine Rich repeats (2 copies)	7.5E-08	23	27.00	142	177
LRR_1	Leucine Rich Repeat	0.072	4	20.60	142	162
LRR_6	Leucine Rich repeat	0.17	2	23.40	142	155
LRR_6	Leucine Rich repeat	3.1E-05	14	23.40	163	179
LRR_1	Leucine Rich Repeat	0.00019	12	20.60	167	188
LRR_8	Leucine rich repeat	6.8E-08	22	27.00	188	223
LRR_4	Leucine Rich repeats (2 copies)	3.1E-08	24	27.00	189	229
LRR_1	Leucine Rich Repeat	0.0015	9	20.60	190	212
LRR_6	Leucine Rich repeat	0.052	4	23.40	190	199
LRR_6	Leucine Rich repeat	0.33	1	23.40	215	227
LRR_2	Leucine Rich Repeat	0.84	0	20.90	215	228
LRR_1	Leucine Rich Repeat	0.0064	7	20.60	215	234
LRR_4	Leucine Rich repeats (2 copies)	2.8E-06	18	27.00	215	253
LRR_8	Leucine rich repeat	5.7E-06	16	27.00	235	273
Suppressor_P21	RNA silencing suppressor P21	0.016	5	28.90	235	251
LRR_6	Leucine Rich repeat	0.013	6	23.40	236	247
LRR_2	Leucine Rich Repeat	0.44	1	20.90	238	250
LRR_1	Leucine Rich Repeat	0.0056	7	20.60	238	260
LRR_1	Leucine Rich Repeat	0.44	2	20.60	266	281
LRR_8	Leucine rich repeat	3.7E-08	23	27.00	286	344
LRR_6	Leucine Rich repeat	0.043	4	23.40	286	299
LRR_4	Leucine Rich repeats (2 copies)	1.3E-05	15	27.00	287	323
LRR_1	Leucine Rich Repeat	0.034	5	20.60	287	308
DUF3809	Protein of unknown function (DUF3809)	0.03	4	25.00	295	327
LRR_1	Leucine Rich Repeat	0.16	3	20.60	311	332
LRR_4	Leucine Rich repeats (2 copies)	0.00091	10	27.00	311	347
Suppressor_P21	RNA silencing suppressor P21	0.036	4	28.90	329	347
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.16	2	27.70	329	343
LRR_6	Leucine Rich repeat	0.5	1	23.40	331	347
LRR_1	Leucine Rich Repeat	0.44	2	20.60	334	347
LRR_8	Leucine rich repeat	5.4E-05	13	27.00	384	421
LRR_4	Leucine Rich repeats (2 copies)	7.2E-07	19	27.00	386	425
LRR_1	Leucine Rich Repeat	0.0054	7	20.60	387	404
LRR_6	Leucine Rich repeat	0.0038	7	23.40	387	400
LRR_2	Leucine Rich Repeat	0.34	2	20.90	387	400
LRR_8	Leucine rich repeat	3.7E-06	16	27.00	431	469
LRR_4	Leucine Rich repeats (2 copies)	0.0006	10	27.00	436	469
LRR_1	Leucine Rich Repeat	0.28	2	20.60	436	452
LRR_6	Leucine Rich repeat	0.55	1	23.40	437	446
LRR_2	Leucine Rich Repeat	0.011	6	20.90	458	471
LRR_1	Leucine Rich Repeat	0.12	3	20.60	458	480
LRR_4	Leucine Rich repeats (2 copies)	2.9E-05	14	27.00	458	495
LRR_8	Leucine rich repeat	2.1E-12	36	27.00	458	517
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.07	3	27.70	478	515
LRR_6	Leucine Rich repeat	0.62	0	23.40	480	495
LRR_8	Leucine rich repeat	1.2E-11	34	27.00	482	541
LRR_1	Leucine Rich Repeat	0.22	3	20.60	483	504
LRR_6	Leucine Rich repeat	0.017	5	23.40	504	519
LRR_1	Leucine Rich Repeat	0.00074	10	20.60	506	528
LRR_4	Leucine Rich repeats (2 copies)	1.2E-06	19	27.00	506	542
LRR_8	Leucine rich repeat	0.0015	8	27.00	525	549
LRR_6	Leucine Rich repeat	0.00053	10	23.40	528	544
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	146	23.10	688	956
Pkinase	Protein kinase domain	0	141	20.40	688	897
Kinase-like	Kinase-like	0.00017	11	25.00	787	890