c2pfam

AT5G02430.1 :

Domain Description Evalue Bits GA Start End
WD40_like WD40-like domain 0.43 -2 40.00 271 307
Nup160 Nucleoporin Nup120/160 1 -4 19.20 376 406
WD40 WD domain, G-beta repeat 1.8E-08 24 21.00 407 438
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.00029 10 22.90 408 447
WD40 WD domain, G-beta repeat 1.7E-10 30 21.00 510 546
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.00029 10 22.90 520 568
WD40_like WD40-like domain 2.5E-09 25 40.00 528 632
Nup160 Nucleoporin Nup120/160 0.00012 9 19.20 530 554
WD40 WD domain, G-beta repeat 7.4E-07 19 21.00 552 588
Nup160 Nucleoporin Nup120/160 5.9E-05 10 19.20 562 608
BBS2_Mid Ciliary BBSome complex subunit 2, middle region 0.016 4 27.00 569 630
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 4E-07 19 22.90 585 640
WD40 WD domain, G-beta repeat 0.0024 7 21.00 604 628
WD40 WD domain, G-beta repeat 0.14 2 21.00 650 678
BBS2_Mid Ciliary BBSome complex subunit 2, middle region 0.0027 6 27.00 663 690
WD40 WD domain, G-beta repeat 0.013 5 21.00 704 722
BBS2_Mid Ciliary BBSome complex subunit 2, middle region 0.012 4 27.00 705 739

905

WD40_like
Nup160
WD40
ANAPC4_WD40
WD40
ANAPC4_WD40
WD40_like
Nup160
WD40
Nup160
BBS2_Mid
ANAPC4_WD40
WD40
WD40
BBS2_Mid
WD40
BBS2_Mid

References:

BBS2_Mid

ANAPC4_WD40

Nup160
8557736 Nup120p: a yeast nucleoporin required for NPC distribution and mRNA transport. J Cell Biol. 1995;131:1659-1675.
11684705 Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export. J Cell Biol 2001;155:339-354.
17360435 Cell-cycle-dependent phosphorylation of the nuclear pore Nup107-160 subcomplex. Proc Natl Acad Sci U S A. 2007;104:3811-3816.

WD40_like

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

Domain	Description	Evalue	Bits	GA	Start	End
WD40_like	WD40-like domain	0.43	-2	40.00	271	307
Nup160	Nucleoporin Nup120/160	1	-4	19.20	376	406
WD40	WD domain, G-beta repeat	1.8E-08	24	21.00	407	438
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.00029	10	22.90	408	447
WD40	WD domain, G-beta repeat	1.7E-10	30	21.00	510	546
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.00029	10	22.90	520	568
WD40_like	WD40-like domain	2.5E-09	25	40.00	528	632
Nup160	Nucleoporin Nup120/160	0.00012	9	19.20	530	554
WD40	WD domain, G-beta repeat	7.4E-07	19	21.00	552	588
Nup160	Nucleoporin Nup120/160	5.9E-05	10	19.20	562	608
BBS2_Mid	Ciliary BBSome complex subunit 2, middle region	0.016	4	27.00	569	630
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	4E-07	19	22.90	585	640
WD40	WD domain, G-beta repeat	0.0024	7	21.00	604	628
WD40	WD domain, G-beta repeat	0.14	2	21.00	650	678
BBS2_Mid	Ciliary BBSome complex subunit 2, middle region	0.0027	6	27.00	663	690
WD40	WD domain, G-beta repeat	0.013	5	21.00	704	722
BBS2_Mid	Ciliary BBSome complex subunit 2, middle region	0.012	4	27.00	705	739