AT5G04290.1 :
Domain
Description
Evalue
Bits
GA
Start
End
Spt5_N
Spt5 transcription elongation factor, acidic N-terminal
0.00059
9
24.00
46
135
Spt5-NGN
Early transcription elongation factor of RNA pol II, NGN section
3.8E-23
69
20.20
148
231
KOW
KOW motif
3.1E-06
15
20.70
243
272
KOW
KOW motif
0.67
-2
20.70
451
465
KOW
KOW motif
1.5E-05
13
20.70
504
527
1493
Spt5_N
Spt5-NGN
KOW
KOW
KOW
References:
KOW
8987397
KOW: a novel motif linking a bacterial transcription factor with ribosomal proteins.
Trends Biochem Sci 1996;21:425-426.
Spt5_N
12202748
Novel domains and orthologues of eukaryotic transcription elongation factors.
Nucleic Acids Res. 2002;30:3643-3652.
19460865
Characterization of the Schizosaccharomyces pombe Spt5-Spt4 complex.
RNA. 2009; [Epub ahead of print]
Spt5-NGN
12202748
Novel domains and orthologues of eukaryotic transcription elongation factors.
Nucleic Acids Res. 2002;30:3643-3652.
19460865
Characterization of the Schizosaccharomyces pombe Spt5-Spt4 complex.
RNA. 2009; [Epub ahead of print]