c2pfam

AT5G04900.1 :

Domain Description Evalue Bits GA Start End
RmlD_sub_bind RmlD substrate binding domain 6.3E-05 11 19.80 81 151
Polysacc_synt_2 Polysaccharide biosynthesis protein 2.7E-06 16 20.20 82 206
adh_short short chain dehydrogenase 0 151 20.50 82 276
Epimerase NAD dependent epimerase/dehydratase family 5.1E-08 22 20.60 82 266
GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 3.8E-05 13 27.00 83 150
KR KR domain 1.1E-12 37 22.60 83 191
adh_short_C2 Enoyl-(Acyl carrier protein) reductase 2.5E-37 118 27.00 86 279
F420_oxidored NADP oxidoreductase coenzyme F420-dependent 7.4E-06 16 21.60 91 124
NAD_binding_2 NAD binding domain of 6-phosphogluconate dehydrogenase 0.00012 12 21.00 92 187
GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 0.03 3 27.00 232 269

348

RmlD_sub_bind
Polysacc_synt_2
adh_short
Epimerase
GDP_Man_Dehyd
KR
adh_short_C2
F420_oxidored
NAD_binding_2
GDP_Man_Dehyd

References:

F420_oxidored

KR

adh_short
9735295 The refined crystal structure of Drosophila lebanonensis alcohol dehydrogenase at 1.9 A resolution. J Mol Biol 1998;282:383-399.
10387002 Structure of tropinone reductase-II complexed with NADP+ and pseudotropine at 1.9 A resolution: implication for stereospecific substrate binding and catalysis. Biochemistry 1999;38:7630-7637.

GDP_Man_Dehyd

NAD_binding_2

Epimerase
9174344 Structural analysis of UDP-sugar binding to UDP-galactose 4-epimerase from Escherichia coli. Biochemistry 1997;36:6294-6304.

Polysacc_synt_2
7961465 Sequence analysis and molecular characterization of genes required for the biosynthesis of type 1 capsular polysaccharide in Staphylococcus aureus. J Bacteriol 1994;176:7005-7016.
9079898 Identification of additional genes required for O-antigen biosynthesis in Vibrio cholerae O1. J Bacteriol 1997;179:2147-2153.

adh_short_C2

RmlD_sub_bind
12057193 Variation on a Theme of SDR. dTDP-6-Deoxy-L- lyxo-4-Hexulose Reductase (RmlD) Shows a New Mg(2+)-Dependent Dimerization Mode. Structure (Camb) 2002;10:773-786.
10802738 RmlC, the third enzyme of dTDP-L-rhamnose pathway, is a new class of epimerase. Nat Struct Biol 2000;7:398-402.

Domain	Description	Evalue	Bits	GA	Start	End
RmlD_sub_bind	RmlD substrate binding domain	6.3E-05	11	19.80	81	151
Polysacc_synt_2	Polysaccharide biosynthesis protein	2.7E-06	16	20.20	82	206
adh_short	short chain dehydrogenase	0	151	20.50	82	276
Epimerase	NAD dependent epimerase/dehydratase family	5.1E-08	22	20.60	82	266
GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	3.8E-05	13	27.00	83	150
KR	KR domain	1.1E-12	37	22.60	83	191
adh_short_C2	Enoyl-(Acyl carrier protein) reductase	2.5E-37	118	27.00	86	279
F420_oxidored	NADP oxidoreductase coenzyme F420-dependent	7.4E-06	16	21.60	91	124
NAD_binding_2	NAD binding domain of 6-phosphogluconate dehydrogenase	0.00012	12	21.00	92	187
GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	0.03	3	27.00	232	269