c2pfam

AT5G05160.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 1.2E-10 31 20.70 30 67
LRR_2 Leucine Rich Repeat 0.42 1 20.90 53 69
LRR_8 Leucine rich repeat 2.6E-10 30 27.00 88 134
LRR_4 Leucine Rich repeats (2 copies) 0.0049 7 27.00 88 114
LRR_2 Leucine Rich Repeat 0.061 4 20.90 99 112
LRR_4 Leucine Rich repeats (2 copies) 5.9E-06 16 27.00 100 138
LRR_1 Leucine Rich Repeat 0.0025 8 20.60 100 121
LRR_6 Leucine Rich repeat 0.93 0 23.40 100 109
LRR_6 Leucine Rich repeat 0.012 6 23.40 121 137
LRR_1 Leucine Rich Repeat 0.024 5 20.60 123 136
LRR_2 Leucine Rich Repeat 0.11 3 20.90 123 138
LRR_8 Leucine rich repeat 5.1E-07 19 27.00 148 183
LRR_4 Leucine Rich repeats (2 copies) 8E-07 19 27.00 149 191
LRR_1 Leucine Rich Repeat 0.0029 8 20.60 150 171
LRR_6 Leucine Rich repeat 0.049 4 23.40 150 162
LRR_4 Leucine Rich repeats (2 copies) 1.2E-05 15 27.00 174 210
LRR_1 Leucine Rich Repeat 0.12 3 20.60 175 191
LRR_8 Leucine rich repeat 0.0018 8 27.00 192 208
LRR_6 Leucine Rich repeat 0.015 5 23.40 194 208
LRR_1 Leucine Rich Repeat 0.0085 7 20.60 197 216
ABC1 ABC1 family 2.8E-05 14 20.60 351 393
Pkinase Protein kinase domain 0 136 20.40 351 610
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 128 23.10 351 611
NAD_Gly3P_dh_N NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 0.00077 9 23.10 352 393
Kinase-like Kinase-like 3.9E-05 13 25.00 456 543
NAD_Gly3P_dh_N NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 0.14 2 23.10 465 510

640

LRRNT_2
LRR_2
LRR_8
LRR_4
LRR_2
LRR_4
LRR_1
LRR_6
LRR_6
LRR_1
LRR_2
LRR_8
LRR_4
LRR_1
LRR_6
LRR_4
LRR_1
LRR_8
LRR_6
LRR_1
ABC1
Pkinase
PK_Tyr_Ser-Thr
NAD_Gly3P_dh_N
Kinase-like
NAD_Gly3P_dh_N

References:

LRR_8

ABC1
1648478 ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex. EMBO J 1991;10:2023-2031.
9422602 Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J Bacteriol 1998;180:128-135.

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

Kinase-like

LRR_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

NAD_Gly3P_dh_N
12032156 Kinetic regulation of the mitochondrial glycerol-3-phosphate dehydrogenase by the external NADH dehydrogenase in Saccharomyces cerevisiae. J Biol Chem 2002;277:27991-27995.
10801498 A potential target enzyme for trypanocidal drugs revealed by the crystal structure of NAD-dependent glycerol-3-phosphate dehydrogenase from Leishmania mexicana. Structure Fold Des 2000;8:541-552.

LRR_4

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	1.2E-10	31	20.70	30	67
LRR_2	Leucine Rich Repeat	0.42	1	20.90	53	69
LRR_8	Leucine rich repeat	2.6E-10	30	27.00	88	134
LRR_4	Leucine Rich repeats (2 copies)	0.0049	7	27.00	88	114
LRR_2	Leucine Rich Repeat	0.061	4	20.90	99	112
LRR_4	Leucine Rich repeats (2 copies)	5.9E-06	16	27.00	100	138
LRR_1	Leucine Rich Repeat	0.0025	8	20.60	100	121
LRR_6	Leucine Rich repeat	0.93	0	23.40	100	109
LRR_6	Leucine Rich repeat	0.012	6	23.40	121	137
LRR_1	Leucine Rich Repeat	0.024	5	20.60	123	136
LRR_2	Leucine Rich Repeat	0.11	3	20.90	123	138
LRR_8	Leucine rich repeat	5.1E-07	19	27.00	148	183
LRR_4	Leucine Rich repeats (2 copies)	8E-07	19	27.00	149	191
LRR_1	Leucine Rich Repeat	0.0029	8	20.60	150	171
LRR_6	Leucine Rich repeat	0.049	4	23.40	150	162
LRR_4	Leucine Rich repeats (2 copies)	1.2E-05	15	27.00	174	210
LRR_1	Leucine Rich Repeat	0.12	3	20.60	175	191
LRR_8	Leucine rich repeat	0.0018	8	27.00	192	208
LRR_6	Leucine Rich repeat	0.015	5	23.40	194	208
LRR_1	Leucine Rich Repeat	0.0085	7	20.60	197	216
ABC1	ABC1 family	2.8E-05	14	20.60	351	393
Pkinase	Protein kinase domain	0	136	20.40	351	610
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	128	23.10	351	611
NAD_Gly3P_dh_N	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus	0.00077	9	23.10	352	393
Kinase-like	Kinase-like	3.9E-05	13	25.00	456	543
NAD_Gly3P_dh_N	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus	0.14	2	23.10	465	510