c2pfam

AT5G05850.1 :

Domain Description Evalue Bits GA Start End
YkyA Putative cell-wall binding lipoprotein 0.014 4 22.00 94 192
ATP-synt_B ATP synthase B/B' CF(0) 0.00085 8 22.40 147 203
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.4 -1 27.70 187 254
LRR_8 Leucine rich repeat 2E-10 29 27.00 216 260
LRR_4 Leucine Rich repeats (2 copies) 4E-08 22 27.00 228 267
LRR_1 Leucine Rich Repeat 0.017 5 20.60 229 249
LRR_1 Leucine Rich Repeat 0.062 3 20.60 251 267
LRR_8 Leucine rich repeat 8.6E-12 34 27.00 251 308
LRR_4 Leucine Rich repeats (2 copies) 0.002 8 27.00 261 289
LRR_4 Leucine Rich repeats (2 copies) 0.00011 11 27.00 274 309
LRR_1 Leucine Rich Repeat 0.0013 8 20.60 274 295
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.38 -1 27.70 274 327
LRR_4 Leucine Rich repeats (2 copies) 9.6E-05 12 27.00 297 336
LRR_1 Leucine Rich Repeat 0.4 1 20.60 298 312
LRR_8 Leucine rich repeat 1.4E-09 26 27.00 321 376
LRR_4 Leucine Rich repeats (2 copies) 4.9E-08 22 27.00 344 384
LRR_1 Leucine Rich Repeat 0.031 4 20.60 344 362
LRR_5 BspA type Leucine rich repeat region (6 copies) 0.00062 9 27.70 365 422
LRR_1 Leucine Rich Repeat 0.00015 11 20.60 367 388
LRR_8 Leucine rich repeat 8.5E-13 37 27.00 384 426
LRR_4 Leucine Rich repeats (2 copies) 1.3E-10 30 27.00 392 424
LRR_1 Leucine Rich Repeat 0.00014 11 20.60 392 411
LRR_1 Leucine Rich Repeat 0.005 7 20.60 415 430
YkyA Putative cell-wall binding lipoprotein 0.00098 8 22.00 433 490

506

YkyA
ATP-synt_B
LRR_5
LRR_8
LRR_4
LRR_1
LRR_1
LRR_8
LRR_4
LRR_4
LRR_1
LRR_5
LRR_4
LRR_1
LRR_8
LRR_4
LRR_1
LRR_5
LRR_1
LRR_8
LRR_4
LRR_1
LRR_1
YkyA

References:

ATP-synt_B

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRR_8

LRR_5

LRR_4

YkyA
16684363 Conserved genes in a path from commensalism to pathogenicity: comparative phylogenetic profiles of Staphylococcus epidermidis RP62A and ATCC12228. BMC Genomics. 2006;7:112.

Domain	Description	Evalue	Bits	GA	Start	End
YkyA	Putative cell-wall binding lipoprotein	0.014	4	22.00	94	192
ATP-synt_B	ATP synthase B/B' CF(0)	0.00085	8	22.40	147	203
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.4	-1	27.70	187	254
LRR_8	Leucine rich repeat	2E-10	29	27.00	216	260
LRR_4	Leucine Rich repeats (2 copies)	4E-08	22	27.00	228	267
LRR_1	Leucine Rich Repeat	0.017	5	20.60	229	249
LRR_1	Leucine Rich Repeat	0.062	3	20.60	251	267
LRR_8	Leucine rich repeat	8.6E-12	34	27.00	251	308
LRR_4	Leucine Rich repeats (2 copies)	0.002	8	27.00	261	289
LRR_4	Leucine Rich repeats (2 copies)	0.00011	11	27.00	274	309
LRR_1	Leucine Rich Repeat	0.0013	8	20.60	274	295
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.38	-1	27.70	274	327
LRR_4	Leucine Rich repeats (2 copies)	9.6E-05	12	27.00	297	336
LRR_1	Leucine Rich Repeat	0.4	1	20.60	298	312
LRR_8	Leucine rich repeat	1.4E-09	26	27.00	321	376
LRR_4	Leucine Rich repeats (2 copies)	4.9E-08	22	27.00	344	384
LRR_1	Leucine Rich Repeat	0.031	4	20.60	344	362
LRR_5	BspA type Leucine rich repeat region (6 copies)	0.00062	9	27.70	365	422
LRR_1	Leucine Rich Repeat	0.00015	11	20.60	367	388
LRR_8	Leucine rich repeat	8.5E-13	37	27.00	384	426
LRR_4	Leucine Rich repeats (2 copies)	1.3E-10	30	27.00	392	424
LRR_1	Leucine Rich Repeat	0.00014	11	20.60	392	411
LRR_1	Leucine Rich Repeat	0.005	7	20.60	415	430
YkyA	Putative cell-wall binding lipoprotein	0.00098	8	22.00	433	490