c2pfam

AT5G06860.1 :

Domain Description Evalue Bits GA Start End
Conotoxin Conotoxin 0.00016 12 25.10 7 61
LRRNT_2 Leucine rich repeat N-terminal domain 7.1E-14 41 20.70 27 63
LRR_6 Leucine Rich repeat 1 -1 23.40 69 84
FNIP FNIP Repeat 0.00013 11 20.90 91 166
LRR_4 Leucine Rich repeats (2 copies) 0.00046 10 27.00 97 136
LRR_8 Leucine rich repeat 1.9E-08 23 27.00 106 155
LRR_6 Leucine Rich repeat 0.2 1 23.40 119 133
LRR_1 Leucine Rich Repeat 0.01 6 20.60 120 140
LRR_6 Leucine Rich repeat 0.0024 7 23.40 143 158
LRR_4 Leucine Rich repeats (2 copies) 1.9E-06 17 27.00 143 183
LRR_1 Leucine Rich Repeat 0.00048 10 20.60 144 165
LRR_8 Leucine rich repeat 2.5E-06 16 27.00 160 204
LRR_6 Leucine Rich repeat 0.027 4 23.40 167 181
LRR_1 Leucine Rich Repeat 0.0042 7 20.60 172 190
LRR_1 Leucine Rich Repeat 0.026 5 20.60 197 214
LRR_6 Leucine Rich repeat 0.079 3 23.40 197 206
LRR_8 Leucine rich repeat 0.0012 8 27.00 197 249
LRR_4 Leucine Rich repeats (2 copies) 0.011 5 27.00 197 227
FNIP FNIP Repeat 0.11 2 20.90 206 218
LRR_6 Leucine Rich repeat 0.15 2 23.40 218 230
LRR_8 Leucine rich repeat 0.00096 8 27.00 219 252
LRR_1 Leucine Rich Repeat 0.28 2 20.60 220 232
LRR_4 Leucine Rich repeats (2 copies) 0.006 6 27.00 246 274
FNIP FNIP Repeat 0.33 0 20.90 255 271
LRR_4 Leucine Rich repeats (2 copies) 0.0017 8 27.00 264 295
LRR_8 Leucine rich repeat 0.012 4 27.00 264 297
LRR_6 Leucine Rich repeat 0.0052 6 23.40 264 276
LRR_1 Leucine Rich Repeat 0.17 2 20.60 266 278
LRR_1 Leucine Rich Repeat 0.38 1 20.60 287 301
LRR_6 Leucine Rich repeat 0.74 -1 23.40 287 297

330

Conotoxin
LRRNT_2
LRR_6
FNIP
LRR_4
LRR_8
LRR_6
LRR_1
LRR_6
LRR_4
LRR_1
LRR_8
LRR_6
LRR_1
LRR_1
LRR_6
LRR_8
LRR_4
FNIP
LRR_6
LRR_8
LRR_1
LRR_4
FNIP
LRR_4
LRR_8
LRR_6
LRR_1
LRR_1
LRR_6

References:

FNIP

LRR_8

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_6

LRR_4

Conotoxin
3052286 Peptide toxins from venomous Conus snails. Annu Rev Biochem 1988;57:665-700.
8230223 Three-dimensional structure in solution of the calcium channel blocker omega-conotoxin J Mol Biol 1993;234:405-420.

Domain	Description	Evalue	Bits	GA	Start	End
Conotoxin	Conotoxin	0.00016	12	25.10	7	61
LRRNT_2	Leucine rich repeat N-terminal domain	7.1E-14	41	20.70	27	63
LRR_6	Leucine Rich repeat	1	-1	23.40	69	84
FNIP	FNIP Repeat	0.00013	11	20.90	91	166
LRR_4	Leucine Rich repeats (2 copies)	0.00046	10	27.00	97	136
LRR_8	Leucine rich repeat	1.9E-08	23	27.00	106	155
LRR_6	Leucine Rich repeat	0.2	1	23.40	119	133
LRR_1	Leucine Rich Repeat	0.01	6	20.60	120	140
LRR_6	Leucine Rich repeat	0.0024	7	23.40	143	158
LRR_4	Leucine Rich repeats (2 copies)	1.9E-06	17	27.00	143	183
LRR_1	Leucine Rich Repeat	0.00048	10	20.60	144	165
LRR_8	Leucine rich repeat	2.5E-06	16	27.00	160	204
LRR_6	Leucine Rich repeat	0.027	4	23.40	167	181
LRR_1	Leucine Rich Repeat	0.0042	7	20.60	172	190
LRR_1	Leucine Rich Repeat	0.026	5	20.60	197	214
LRR_6	Leucine Rich repeat	0.079	3	23.40	197	206
LRR_8	Leucine rich repeat	0.0012	8	27.00	197	249
LRR_4	Leucine Rich repeats (2 copies)	0.011	5	27.00	197	227
FNIP	FNIP Repeat	0.11	2	20.90	206	218
LRR_6	Leucine Rich repeat	0.15	2	23.40	218	230
LRR_8	Leucine rich repeat	0.00096	8	27.00	219	252
LRR_1	Leucine Rich Repeat	0.28	2	20.60	220	232
LRR_4	Leucine Rich repeats (2 copies)	0.006	6	27.00	246	274
FNIP	FNIP Repeat	0.33	0	20.90	255	271
LRR_4	Leucine Rich repeats (2 copies)	0.0017	8	27.00	264	295
LRR_8	Leucine rich repeat	0.012	4	27.00	264	297
LRR_6	Leucine Rich repeat	0.0052	6	23.40	264	276
LRR_1	Leucine Rich Repeat	0.17	2	20.60	266	278
LRR_1	Leucine Rich Repeat	0.38	1	20.60	287	301
LRR_6	Leucine Rich repeat	0.74	-1	23.40	287	297