c2pfam

AT5G06950.1 :

Domain Description Evalue Bits GA Start End
Ribosomal_L35p Ribosomal protein L35 0.00038 10 22.20 42 78
CENP-H Centromere protein H (CENP-H) 0.00028 10 23.00 42 98
bZIP_2 Basic region leucine zipper 1.4E-09 27 21.30 44 88
bZIP_Maf bZIP Maf transcription factor 4.9E-06 16 20.70 46 93
bZIP_1 bZIP transcription factor 2.7E-10 29 22.00 46 86
bZIP_1 bZIP transcription factor 0.56 -1 22.00 122 132
DOG1 Seed dormancy control 1.9E-37 116 27.00 128 203
bZIP_Maf bZIP Maf transcription factor 0.7 -1 20.70 218 236
CENP-H Centromere protein H (CENP-H) 0.27 1 23.00 225 242
CPSF_A CPSF A subunit region 3.2E-05 12 20.40 227 296

330

Ribosomal_L35p
CENP-H
bZIP_2
bZIP_Maf
bZIP_1
bZIP_1
DOG1
bZIP_Maf
CENP-H
CPSF_A

References:

DOG1

bZIP_Maf
11416124 Phosphorylation of mafa is essential for its transcriptional and biological properties. Mol Cell Biol 2001;21:4441-4452.

bZIP_2
11906833 bZIP transcription factors in Arabidopsis. Trends Plant Sci 2002;7:106-111.
12867624 bZIP proteins of human gammaherpesviruses. J Gen Virol 2003;84:1941-1949.
7780801 Transcription factors 1: bZIP proteins. Protein Profile 1995;2:101-168.

bZIP_1

CPSF_A
11421366 The 3'-end-processing factor CPSF is required for the splicing of single-intron pre-mRNAs in vivo. RNA 2001;7:920-931.

CENP-H
10488063 Characterization of a novel kinetochore protein, CENP-H. J Biol Chem 1999;274:27343-27346.
11500386 CENP-H, a constitutive centromere component, is required for centromere targeting of CENP-C in vertebrate cells. EMBO J 2001;20:4603-4617.

Ribosomal_L35p

Domain	Description	Evalue	Bits	GA	Start	End
Ribosomal_L35p	Ribosomal protein L35	0.00038	10	22.20	42	78
CENP-H	Centromere protein H (CENP-H)	0.00028	10	23.00	42	98
bZIP_2	Basic region leucine zipper	1.4E-09	27	21.30	44	88
bZIP_Maf	bZIP Maf transcription factor	4.9E-06	16	20.70	46	93
bZIP_1	bZIP transcription factor	2.7E-10	29	22.00	46	86
bZIP_1	bZIP transcription factor	0.56	-1	22.00	122	132
DOG1	Seed dormancy control	1.9E-37	116	27.00	128	203
bZIP_Maf	bZIP Maf transcription factor	0.7	-1	20.70	218	236
CENP-H	Centromere protein H (CENP-H)	0.27	1	23.00	225	242
CPSF_A	CPSF A subunit region	3.2E-05	12	20.40	227	296