AT5G08080.1 :

DomainDescriptionEvalueBitsGAStartEnd
Tropomyosin_1Tropomyosin like0.000121234.2030103
SyntaxinSyntaxin023925.0034239
DUF2203Uncharacterized conserved protein (DUF2203)0.0071720.803597
NOG1_NNOG1 N-terminal helical domain0.0091622.903889
CCDC-167Coiled-coil domain-containing protein 1670.45127.0039103
DASH_Dam1DASH complex subunit Dam10.19221.404063
DUF4094Domain of unknown function (DUF4094)0.83024.504163
DUF641Plant protein of unknown function (DUF641)0.15323.1043107
MutS_IIIMutS domain III0.0095622.5047155
Neur_chan_membNeurotransmitter-gated ion-channel transmembrane region0.0035723.1056156
DUF641Plant protein of unknown function (DUF641)0.034523.10126154
NOG1_NNOG1 N-terminal helical domain0.9-122.90134159
DASH_Dam1DASH complex subunit Dam10.37121.40135151
DUF2203Uncharacterized conserved protein (DUF2203)0.021620.80136227
PXT1Peroxisomal testis-specific protein 10.0011927.00144163
ATPase_2ATPase domain predominantly from Archaea2.8E-051433.20145236
DUF4330Domain of unknown function (DUF4330)0.02527.50162243
DUF641Plant protein of unknown function (DUF641)0.001923.10169228
DUF4094Domain of unknown function (DUF4094)0.00111024.50180225
NOG1_NNOG1 N-terminal helical domain0.00071022.90189227
DUF2203Uncharacterized conserved protein (DUF2203)0.072420.80203227
MutS_IIIMutS domain III0.0054722.50204235
Tropomyosin_1Tropomyosin like0.019534.20206272
DASH_Dam1DASH complex subunit Dam10.011621.40206227
Neur_chan_membNeurotransmitter-gated ion-channel transmembrane region0.14223.10236293
SNARESNARE domain6.3E-216430.00240292
Fusion_glyFusion glycoprotein F03.2E-051219.30241292
CCDC-167Coiled-coil domain-containing protein 1670.0016927.00251288
DUF4330Domain of unknown function (DUF4330)0.014627.50281302

 304

Tropomyosin_1
Syntaxin
DUF2203
NOG1_N
CCDC-167
DASH_Dam1
DUF4094
DUF641
MutS_III
Neur_chan_memb
DUF641
NOG1_N
DASH_Dam1
DUF2203
PXT1
ATPase_2
DUF4330
DUF641
DUF4094
NOG1_N
DUF2203
MutS_III
Tropomyosin_1
DASH_Dam1
Neur_chan_memb
SNARE
Fusion_gly
CCDC-167
DUF4330


References:

MutS_III
9722634 Domain organization and functional analysis of Thermus thermophilus MutS protein [published erratum appears in Nucleic Acids Res 1998 Oct 15;26(20):following 4789] Nucleic Acids Res 1998;26:4153-4159.
8036718 Colon cancer and DNA repair: have mismatches met their match? Trends Genet 1994;10:164-168.
8510668 The yeast gene MSH3 defines a new class of eukaryotic MutS homologues. Mol Gen Genet 1993;239:97-108.
11048710 Crystal structures of mismatch repair protein MutS and its complex with a substrate DNA. Nature 2000;407:703-710.

DASH_Dam1
11799062 The mitotic spindle is required for loading of the DASH complex onto the kinetochore. Genes Dev 2002;16:183-197.
15640796 The yeast DASH complex forms closed rings on microtubules. Nat Struct Mol Biol. 2005;12:138-143.
15664196 Formation of a dynamic kinetochore- microtubule interface through assembly of the Dam1 ring complex. Mol Cell. 2005;17:277-290.
15632076 Genetic analysis of the kinetochore DASH complex reveals an antagonistic relationship with the ras/protein kinase A pathway and a novel subunit required for Ask1 association. Mol Cell Biol. 2005;25:767-778.

DUF4330

DUF2203

CCDC-167

Syntaxin
11839791 Characterization of temperature-sensitive mutations in the yeast syntaxin 1 homologues Sso1p and Sso2p, and evidence of a distinct function for Sso1p in sporulation. J Cell Sci 2002;115:409-420.
11157748 t-SNARE dephosphorylation promotes SNARE assembly and exocytosis in yeast. EMBO J 2001;20:411-421.
11224573 Vam3p structure reveals conserved and divergent properties of syntaxins. Nat Struct Biol 2001;8:258-264.
11224554 The taming of the SNARE. Nat Struct Biol 2001;8:186-188.
12072456 Gene overexpression as a tool for identifying new trans-acting factors involved in translation termination in Saccharomyces cerevisiae. Genetics 2002;161:585-594.
11737951 The syntaxins. Genome Biol 2001;2:REVIEWS3012.

SNARE
9096343 A conserved domain is present in different families of vesicular fusion proteins: a new superfamily. Proc Natl Acad Sci U S A 1997;94:3046-3051.

Neur_chan_memb

Tropomyosin_1

Fusion_gly

ATPase_2

NOG1_N

PXT1

DUF641

DUF4094