c2pfam

AT5G08120.1 :

Domain Description Evalue Bits GA Start End
DUF812 Protein of unknown function (DUF812) 5.3E-07 19 30.00 66 236
FAM76 FAM76 protein 0.0058 6 28.50 78 215
Spc7 Spc7 kinetochore protein 0.0028 6 34.00 106 178
YlbD_coat Putative coat protein 0.29 1 27.00 111 172
V_ATPase_I V-type ATPase 116kDa subunit family 0.00042 8 26.50 123 240
APG6_N Apg6 coiled-coil region 0.48 1 45.00 124 215
Sec2p GDP/GTP exchange factor Sec2p 0.033 4 22.30 128 175
Atg14 Vacuolar sorting 38 and autophagy-related subunit 14 0.0024 7 33.20 135 236
Ly49 Ly49-like protein, N-terminal region 0.0021 8 30.00 135 196
DUF1664 Protein of unknown function (DUF1664) 0.028 4 30.00 140 199
Sec20 Sec20 0.00091 9 27.00 142 202
NPV_P10 Nucleopolyhedrovirus P10 protein 0.00028 11 29.80 142 186
PTB Phosphotyrosine-binding domain 2.9E-05 14 20.60 160 212
Sec2p GDP/GTP exchange factor Sec2p 0.0014 8 22.30 167 210
Spc7 Spc7 kinetochore protein 0.00082 8 34.00 177 250
DUF1664 Protein of unknown function (DUF1664) 0.012 6 30.00 196 252
NPV_P10 Nucleopolyhedrovirus P10 protein 0.16 2 29.80 224 250
APG6_N Apg6 coiled-coil region 0.00019 12 45.00 228 306
YlbD_coat Putative coat protein 0.016 5 27.00 228 269

326

DUF812
FAM76
Spc7
YlbD_coat
V_ATPase_I
APG6_N
Sec2p
Atg14
Ly49
DUF1664
Sec20
NPV_P10
PTB
Sec2p
Spc7
DUF1664
NPV_P10
APG6_N
YlbD_coat

References:

Atg14

NPV_P10
9634101 The single-nucleocapsid nucleopolyhedrovirus of Buzura suppressaria encodes a P10 protein. J Gen Virol 1998;79:1553-1562.

DUF812

PTB
11023826 Molecular characterization of human tensin. Biochem J 2000;351:403-411.
14592531 Tensin. Int J Biochem Cell Biol 2004;36:31-34.

DUF1664

FAM76

APG6_N

Ly49
15607796 Mouse Ly49 NK receptors: balancing activation and inhibition. Mol Immunol 2005;42:445-450.
10925254 Ly-49P activates NK-mediated lysis by recognizing H-2Dd. J Immunol 2000;165:1771-1781.

V_ATPase_I
10224039 Structure and properties of the vacuolar (H+)-ATPases. J Biol Chem 1999;274:12951-12954.
10340849 Structure and properties of the clathrin-coated vesicle and yeast vacuolar V-ATPases. J Bioenerg Biomembr 1999;31:57-65.

Sec2p
9199166 Sec2p mediates nucleotide exchange on Sec4p and is involved in polarized delivery of post-Golgi vesicles. J Cell Biol 1997;137:1495-1509.

YlbD_coat

Sec20
8334998 The TIP1 gene of Saccharomyces cerevisiae encodes an 80 kDa cytoplasmic protein that interacts with the cytoplasmic domain of Sec20p. EMBO J 1993;12:2831-2840.

Spc7
15371542 The fission yeast kinetochore component Spc7 associates with the EB1 family member Mal3 and is required for kinetochore-spindle association. Mol Biol Cell 2004;15:5255-5267.

Domain	Description	Evalue	Bits	GA	Start	End
DUF812	Protein of unknown function (DUF812)	5.3E-07	19	30.00	66	236
FAM76	FAM76 protein	0.0058	6	28.50	78	215
Spc7	Spc7 kinetochore protein	0.0028	6	34.00	106	178
YlbD_coat	Putative coat protein	0.29	1	27.00	111	172
V_ATPase_I	V-type ATPase 116kDa subunit family	0.00042	8	26.50	123	240
APG6_N	Apg6 coiled-coil region	0.48	1	45.00	124	215
Sec2p	GDP/GTP exchange factor Sec2p	0.033	4	22.30	128	175
Atg14	Vacuolar sorting 38 and autophagy-related subunit 14	0.0024	7	33.20	135	236
Ly49	Ly49-like protein, N-terminal region	0.0021	8	30.00	135	196
DUF1664	Protein of unknown function (DUF1664)	0.028	4	30.00	140	199
Sec20	Sec20	0.00091	9	27.00	142	202
NPV_P10	Nucleopolyhedrovirus P10 protein	0.00028	11	29.80	142	186
PTB	Phosphotyrosine-binding domain	2.9E-05	14	20.60	160	212
Sec2p	GDP/GTP exchange factor Sec2p	0.0014	8	22.30	167	210
Spc7	Spc7 kinetochore protein	0.00082	8	34.00	177	250
DUF1664	Protein of unknown function (DUF1664)	0.012	6	30.00	196	252
NPV_P10	Nucleopolyhedrovirus P10 protein	0.16	2	29.80	224	250
APG6_N	Apg6 coiled-coil region	0.00019	12	45.00	228	306
YlbD_coat	Putative coat protein	0.016	5	27.00	228	269