c2pfam

AT5G08710.1 :

Domain Description Evalue Bits GA Start End
SNAP-25 SNAP-25 family 0.0028 6 21.20 38 59
RCC1 Regulator of chromosome condensation (RCC1) repeat 2E-14 42 21.10 54 97
RCC1_2 Regulator of chromosome condensation (RCC1) repeat 5.5E-12 34 21.70 84 113
RCC1 Regulator of chromosome condensation (RCC1) repeat 1.8E-10 30 21.10 102 149
RCC1_2 Regulator of chromosome condensation (RCC1) repeat 2.2E-13 38 21.70 136 165
Kelch_5 Kelch motif 0.00012 10 27.00 144 163
RCC1 Regulator of chromosome condensation (RCC1) repeat 4.7E-17 51 21.10 152 203
RCC1_2 Regulator of chromosome condensation (RCC1) repeat 1.6E-09 26 21.70 191 218
Kelch_5 Kelch motif 0.025 3 27.00 200 217
RCC1 Regulator of chromosome condensation (RCC1) repeat 1.8E-12 36 21.10 207 263
RCC1_2 Regulator of chromosome condensation (RCC1) repeat 0.0012 7 21.70 251 274
Kelch_5 Kelch motif 0.74 -2 27.00 260 274
RCC1 Regulator of chromosome condensation (RCC1) repeat 8.4E-07 18 21.10 267 314
RCC1_2 Regulator of chromosome condensation (RCC1) repeat 4.3E-14 40 21.70 304 330
Kelch_5 Kelch motif 0.029 3 27.00 309 324
RCC1 Regulator of chromosome condensation (RCC1) repeat 8E-17 50 21.10 318 367
SNAP-25 SNAP-25 family 0.022 3 21.20 322 347
RCC1_2 Regulator of chromosome condensation (RCC1) repeat 1.4E-06 16 21.70 354 379
RCC1 Regulator of chromosome condensation (RCC1) repeat 0.035 3 21.10 369 379
RCC1 Regulator of chromosome condensation (RCC1) repeat 4.2E-09 25 21.10 388 430
RCC1_2 Regulator of chromosome condensation (RCC1) repeat 0.00085 7 21.70 418 432

434

SNAP-25
RCC1
RCC1_2
RCC1
RCC1_2
Kelch_5
RCC1
RCC1_2
Kelch_5
RCC1
RCC1_2
Kelch_5
RCC1
RCC1_2
Kelch_5
RCC1
SNAP-25
RCC1_2
RCC1
RCC1
RCC1_2

References:

RCC1
9510255 The 1.7 A crystal structure of the regulator of chromosome condensation (RCC1) reveals a seven-bladed propeller. Nature 1998;392:97-101.

RCC1_2

SNAP-25
7954793 Sec9 is a SNAP-25-like component of a yeast SNARE complex that may be the effector of Sec4 function in exocytosis. Cell 1994;79:245-258.
8226991 Evolutionary conservation of synaptosome-associated protein 25 kDa (SNAP-25) shown by Drosophila and Torpedo cDNA clones. J Biol Chem 1993;268:24408-24414.

Kelch_5

Domain	Description	Evalue	Bits	GA	Start	End
SNAP-25	SNAP-25 family	0.0028	6	21.20	38	59
RCC1	Regulator of chromosome condensation (RCC1) repeat	2E-14	42	21.10	54	97
RCC1_2	Regulator of chromosome condensation (RCC1) repeat	5.5E-12	34	21.70	84	113
RCC1	Regulator of chromosome condensation (RCC1) repeat	1.8E-10	30	21.10	102	149
RCC1_2	Regulator of chromosome condensation (RCC1) repeat	2.2E-13	38	21.70	136	165
Kelch_5	Kelch motif	0.00012	10	27.00	144	163
RCC1	Regulator of chromosome condensation (RCC1) repeat	4.7E-17	51	21.10	152	203
RCC1_2	Regulator of chromosome condensation (RCC1) repeat	1.6E-09	26	21.70	191	218
Kelch_5	Kelch motif	0.025	3	27.00	200	217
RCC1	Regulator of chromosome condensation (RCC1) repeat	1.8E-12	36	21.10	207	263
RCC1_2	Regulator of chromosome condensation (RCC1) repeat	0.0012	7	21.70	251	274
Kelch_5	Kelch motif	0.74	-2	27.00	260	274
RCC1	Regulator of chromosome condensation (RCC1) repeat	8.4E-07	18	21.10	267	314
RCC1_2	Regulator of chromosome condensation (RCC1) repeat	4.3E-14	40	21.70	304	330
Kelch_5	Kelch motif	0.029	3	27.00	309	324
RCC1	Regulator of chromosome condensation (RCC1) repeat	8E-17	50	21.10	318	367
SNAP-25	SNAP-25 family	0.022	3	21.20	322	347
RCC1_2	Regulator of chromosome condensation (RCC1) repeat	1.4E-06	16	21.70	354	379
RCC1	Regulator of chromosome condensation (RCC1) repeat	0.035	3	21.10	369	379
RCC1	Regulator of chromosome condensation (RCC1) repeat	4.2E-09	25	21.10	388	430
RCC1_2	Regulator of chromosome condensation (RCC1) repeat	0.00085	7	21.70	418	432