c2pfam

AT5G10290.1 :

Domain Description Evalue Bits GA Start End
LRRNT_2 Leucine rich repeat N-terminal domain 1.9E-12 37 20.70 27 67
LRR_8 Leucine rich repeat 2.6E-09 27 27.00 93 130
LRR_1 Leucine Rich Repeat 0.0016 9 20.60 95 117
LRR_4 Leucine Rich repeats (2 copies) 3.7E-09 27 27.00 95 130
LRR_6 Leucine Rich repeat 0.003 8 23.40 95 109
LRR_6 Leucine Rich repeat 0.00051 10 23.40 117 132
LRR_1 Leucine Rich Repeat 0.00015 12 20.60 119 141
LRR_8 Leucine rich repeat 1.1E-07 21 27.00 135 178
LRR_6 Leucine Rich repeat 0.64 1 23.40 142 156
LRR_4 Leucine Rich repeats (2 copies) 0.001 10 27.00 142 179
LRR_1 Leucine Rich Repeat 0.015 6 20.60 143 165
PTP_tm Transmembrane domain of protein tyrosine phosphatase, receptor type J 0.00011 12 26.20 208 250
Mid2 Mid2 like cell wall stress sensor 0.00012 12 23.10 214 277
Adeno_E3_CR2 Adenovirus E3 region protein CR2 3.8E-07 20 25.00 225 253
Pkinase Protein kinase domain 0 144 20.40 291 561
PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase 0 141 23.10 293 564
ABC1 ABC1 family 0.00027 11 20.60 293 320
APH Phosphotransferase enzyme family 0.091 2 22.40 328 377
APH Phosphotransferase enzyme family 0.00012 12 22.40 392 441
Pkinase_fungal Fungal protein kinase 4E-07 19 24.10 398 469

613

LRRNT_2
LRR_8
LRR_1
LRR_4
LRR_6
LRR_6
LRR_1
LRR_8
LRR_6
LRR_4
LRR_1
PTP_tm
Mid2
Adeno_E3_CR2
Pkinase
PK_Tyr_Ser-Thr
ABC1
APH
APH
Pkinase_fungal

References:

APH
2163618 Cloning of aminoglycoside phosphotransferase (APH) gene from antibiotic- producing strain of Bacillus circulans into a high-expression vector, pKK223-3. Purification, properties and location of the enzyme [published erratum appears in Biochem J 1991 Feb 1 Biochem J 1990;268:671-677.
2167474 PCR cloning of a streptomycin phosphotransferase (aphE) gene from Streptomyces griseus ATCC 12475. Nucleic Acids Res 1990;18:4615-4615.

Pkinase_fungal

ABC1
1648478 ABC1, a novel yeast nuclear gene has a dual function in mitochondria: it suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex. EMBO J 1991;10:2023-2031.
9422602 Identification and characterization of aarF, a locus required for production of ubiquinone in Providencia stuartii and Escherichia coli and for expression of 2'-N-acetyltransferase in P. stuartii. J Bacteriol 1998;180:128-135.

PTP_tm

LRR_1
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.
8264799 Crystal structure of porcine ribonuclease inhibitor, a protein with leucine-rich repeats. Nature 1993;366:751-756.

LRRNT_2
7817399 The leucine-rich repeat: a versatile binding motif. Trends Biochem Sci 1994;19:415-421.

LRR_8

LRR_6

LRR_4

Pkinase
1956325 Protein kinase catalytic domain sequence database: identification of conserved features of primary structure and classification of family members. Methods Enzymol 1991;200:38-62.
7768349 Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification. FASEB J 1995;9:576-596.
9020587 The protein kinases of budding yeast: six score and more. Trends Biochem Sci 1997;22:18-22.

Adeno_E3_CR2
8627757 Early region 3 of adenovirus type 19 (subgroup D) encodes an HLA-binding protein distinct from that of subgroups B and C. J Virol 1996;70:2832-2841.

Mid2
11113201 Wsc1 and Mid2 are cell surface sensors for cell wall integrity signaling that act through Rom2, a guanine nucleotide exchange factor for Rho1. Mol Cell Biol 2001;21:271-280.

PK_Tyr_Ser-Thr

Domain	Description	Evalue	Bits	GA	Start	End
LRRNT_2	Leucine rich repeat N-terminal domain	1.9E-12	37	20.70	27	67
LRR_8	Leucine rich repeat	2.6E-09	27	27.00	93	130
LRR_1	Leucine Rich Repeat	0.0016	9	20.60	95	117
LRR_4	Leucine Rich repeats (2 copies)	3.7E-09	27	27.00	95	130
LRR_6	Leucine Rich repeat	0.003	8	23.40	95	109
LRR_6	Leucine Rich repeat	0.00051	10	23.40	117	132
LRR_1	Leucine Rich Repeat	0.00015	12	20.60	119	141
LRR_8	Leucine rich repeat	1.1E-07	21	27.00	135	178
LRR_6	Leucine Rich repeat	0.64	1	23.40	142	156
LRR_4	Leucine Rich repeats (2 copies)	0.001	10	27.00	142	179
LRR_1	Leucine Rich Repeat	0.015	6	20.60	143	165
PTP_tm	Transmembrane domain of protein tyrosine phosphatase, receptor type J	0.00011	12	26.20	208	250
Mid2	Mid2 like cell wall stress sensor	0.00012	12	23.10	214	277
Adeno_E3_CR2	Adenovirus E3 region protein CR2	3.8E-07	20	25.00	225	253
Pkinase	Protein kinase domain	0	144	20.40	291	561
PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	0	141	23.10	293	564
ABC1	ABC1 family	0.00027	11	20.60	293	320
APH	Phosphotransferase enzyme family	0.091	2	22.40	328	377
APH	Phosphotransferase enzyme family	0.00012	12	22.40	392	441
Pkinase_fungal	Fungal protein kinase	4E-07	19	24.10	398	469