c2pfam

AT5G10650.1 :

Domain Description Evalue Bits GA Start End
Baculo_IE-1 Baculovirus immediate-early protein (IE-0) 8.9E-05 13 25.30 458 523
FANCL_C FANCL C-terminal domain 8.6E-05 13 20.70 472 508
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 1E-08 25 27.00 473 519
zf-RING_5 zinc-RING finger domain 1.9E-08 25 27.90 474 517
zf-RING_2 Ring finger domain 9.2E-15 45 27.30 474 516
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 2E-11 34 27.00 474 515
Zn_ribbon_17 Zinc-ribbon, C4HC2 type 3.4E-06 17 27.30 474 513
zf-RING_10 zinc RING finger of MSL2 0.00026 12 31.00 474 518
Prok-RING_4 Prokaryotic RING finger family 4 1.6E-05 15 27.00 475 518
zf-RING-like RING-like domain 0.00055 11 21.60 475 515
zf-RING_4 RING/Ubox like zinc-binding domain 0.00063 10 27.00 475 517
PHD PHD-finger 0.001 9 27.90 475 517
RINGv RING-variant domain 0.0033 8 21.60 475 515
zf-RING_11 RING-like zinc finger 1E-10 32 27.00 475 502
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 2.2E-09 28 21.00 475 515
zf-rbx1 RING-H2 zinc finger domain 8.6E-09 26 31.00 475 516
zf-RING_UBOX RING-type zinc-finger 6.5E-08 23 25.20 475 513
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 7.7E-05 13 21.40 483 518
zf-C3H2C3 Zinc-finger 0.00023 12 27.00 493 516
zf-RING_UBOX RING-type zinc-finger 0.55 1 25.20 512 516

525

Baculo_IE-1
FANCL_C
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-C3HC4_2
Zn_ribbon_17
zf-RING_10
Prok-RING_4
zf-RING-like
zf-RING_4
PHD
RINGv
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3H2C3
zf-RING_UBOX

References:

FANCL_C
16474167 The WD40 repeats of FANCL are required for Fanconi anemia core complex assembly. J Biol Chem. 2006;281:10896-10905.

Zn_ribbon_17

zf-RING_11

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

Baculo_IE-1
9188574 A mechanism for negative gene regulation in Autographa californica multinucleocapsid nuclear polyhedrosis virus. J Virol 1997;71:5088-5094.

zf-ANAPC11

zf-C3HC4_2

zf-RING_5

zf-RING_4

zf-RING_2

zf-rbx1

zf-RING-like

RINGv

zf-RING_10

zf-C3HC4_3

Prok-RING_4

zf-RING_UBOX

zf-C3H2C3

PHD
7701562 The PHD finger: implications for chromatin-mediated transcriptional regulation. Trends Biochem Sci 1995;20:56-59.
11124022 Structure of the PHD zinc finger from human williams-beuren syndrome transcription factor J Mol Biol 2000;304:723-729.
17142463 Proteome-wide analysis in S. cerevisiae identifies several PHD fingers as novel direct and selective binding modules of histone H3 methylated at either lysine 4 or lysine 36. J Biol Chem. 2006; [Epub ahead of print]

Domain	Description	Evalue	Bits	GA	Start	End
Baculo_IE-1	Baculovirus immediate-early protein (IE-0)	8.9E-05	13	25.30	458	523
FANCL_C	FANCL C-terminal domain	8.6E-05	13	20.70	472	508
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	1E-08	25	27.00	473	519
zf-RING_5	zinc-RING finger domain	1.9E-08	25	27.90	474	517
zf-RING_2	Ring finger domain	9.2E-15	45	27.30	474	516
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	2E-11	34	27.00	474	515
Zn_ribbon_17	Zinc-ribbon, C4HC2 type	3.4E-06	17	27.30	474	513
zf-RING_10	zinc RING finger of MSL2	0.00026	12	31.00	474	518
Prok-RING_4	Prokaryotic RING finger family 4	1.6E-05	15	27.00	475	518
zf-RING-like	RING-like domain	0.00055	11	21.60	475	515
zf-RING_4	RING/Ubox like zinc-binding domain	0.00063	10	27.00	475	517
PHD	PHD-finger	0.001	9	27.90	475	517
RINGv	RING-variant domain	0.0033	8	21.60	475	515
zf-RING_11	RING-like zinc finger	1E-10	32	27.00	475	502
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	2.2E-09	28	21.00	475	515
zf-rbx1	RING-H2 zinc finger domain	8.6E-09	26	31.00	475	516
zf-RING_UBOX	RING-type zinc-finger	6.5E-08	23	25.20	475	513
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	7.7E-05	13	21.40	483	518
zf-C3H2C3	Zinc-finger	0.00023	12	27.00	493	516
zf-RING_UBOX	RING-type zinc-finger	0.55	1	25.20	512	516