c2pfam

AT1G23180.1 :

Domain Description Evalue Bits GA Start End
HEAT_2 HEAT repeats 0.015 5 27.70 115 201
Proteasom_PSMB Proteasome non-ATPase 26S subunit 9.7E-06 14 19.40 144 286
V-ATPase_H_N V-ATPase subunit H 0.00048 9 20.10 146 237
Arm Armadillo/beta-catenin-like repeat 1.6E-05 15 20.60 146 176
HEAT HEAT repeat 0.013 6 23.50 149 177
RIX1 rRNA processing/ribosome biogenesis 0.00074 9 27.40 150 212
HEAT_EZ HEAT-like repeat 0.1 3 27.00 152 174
Arm Armadillo/beta-catenin-like repeat 2.2E-06 17 20.60 181 218
KAP Kinesin-associated protein (KAP) 4.4E-06 15 19.40 213 323
Arm Armadillo/beta-catenin-like repeat 1.2E-06 18 20.60 221 259
HEAT_2 HEAT repeats 0.00024 11 27.70 228 285
HEAT_EZ HEAT-like repeat 8.4E-05 13 27.00 230 258
HEAT HEAT repeat 0.0034 8 23.50 232 259
V-ATPase_H_N V-ATPase subunit H 0.0065 5 20.10 233 316
RasGEF_N_2 Rapamycin-insensitive companion of mTOR RasGEF_N domain 0.17 2 27.00 233 271
Cnd1 non-SMC mitotic condensation complex subunit 1 0.00031 10 26.40 238 308
HEAT_EZ HEAT-like repeat 0.27 2 27.00 255 285
CTNNBL Catenin-beta-like, Arm-motif containing nuclear 0.018 5 20.90 256 287
Arm Armadillo/beta-catenin-like repeat 0.0029 7 20.60 268 287
Arm Armadillo/beta-catenin-like repeat 0.24 1 20.60 311 322
HEAT_2 HEAT repeats 0.013 6 27.70 440 497
KAP Kinesin-associated protein (KAP) 0.02 3 19.40 451 489
CTNNBL Catenin-beta-like, Arm-motif containing nuclear 0.12 2 20.90 461 481
Arm Armadillo/beta-catenin-like repeat 9.4E-08 22 20.60 464 495
HEAT_EZ HEAT-like repeat 0.66 0 27.00 467 493
Proteasom_PSMB Proteasome non-ATPase 26S subunit 0.91 -3 19.40 502 578
RIX1 rRNA processing/ribosome biogenesis 0.54 -1 27.40 502 539
Cnd1 non-SMC mitotic condensation complex subunit 1 1 -1 26.40 558 619
Arm Armadillo/beta-catenin-like repeat 0.053 3 20.60 561 591
HEAT_2 HEAT repeats 0.73 0 27.70 571 590
V-ATPase_H_N V-ATPase subunit H 0.0027 7 20.10 602 690
RIX1 rRNA processing/ribosome biogenesis 0.00093 9 27.40 658 793
HEAT_2 HEAT repeats 0.0047 7 27.70 721 762
HEAT_EZ HEAT-like repeat 0.45 1 27.00 723 743
Arm Armadillo/beta-catenin-like repeat 0.041 4 20.60 723 743
HEAT_2 HEAT repeats 0.0023 8 27.70 724 813
HEAT HEAT repeat 0.12 3 23.50 724 751
CTNNBL Catenin-beta-like, Arm-motif containing nuclear 0.29 1 20.90 750 779
Arm Armadillo/beta-catenin-like repeat 6.5E-09 25 20.60 755 793
Cnd1 non-SMC mitotic condensation complex subunit 1 0.022 4 26.40 760 800
KAP Kinesin-associated protein (KAP) 8.2E-05 10 19.40 760 817
V-ATPase_H_N V-ATPase subunit H 0.73 -2 20.10 763 798
RasGEF_N_2 Rapamycin-insensitive companion of mTOR RasGEF_N domain 0.00092 9 27.00 766 803
Arm Armadillo/beta-catenin-like repeat 0.0035 7 20.60 797 819

834

HEAT_2
Proteasom_PSMB
V-ATPase_H_N
Arm
HEAT
RIX1
HEAT_EZ
Arm
KAP
Arm
HEAT_2
HEAT_EZ
HEAT
V-ATPase_H_N
RasGEF_N_2
Cnd1
HEAT_EZ
CTNNBL
Arm
Arm
HEAT_2
KAP
CTNNBL
Arm
HEAT_EZ
Proteasom_PSMB
RIX1
Cnd1
Arm
HEAT_2
V-ATPase_H_N
RIX1
HEAT_2
HEAT_EZ
Arm
HEAT_2
HEAT
CTNNBL
Arm
Cnd1
KAP
V-ATPase_H_N
RasGEF_N_2
Arm

References:

HEAT_2

Cnd1

Proteasom_PSMB
16723119 Induction of 26S proteasome subunit PSMB5 by the bifunctional inducer 3-methylcholanthrene through the Nrf2-ARE, but not the AhR/Arnt-XRE, pathway. Biochem Biophys Res Commun. 2006;345:1350-1357.

KAP
10819327 C. elegans KLP-11/OSM-3/KAP-1: orthologs of the sea urchin kinesin-II, and mouse KIF3A/KIFB/KAP3 kinesin complexes. DNA Res 2000;7:121-125.
11912492 Identification of a link between the tumour suppressor APC and the kinesin superfamily. Nat Cell Biol 2002;4:323-327.

V-ATPase_H_N
10954728 Regulation of yeast ectoapyrase ynd1p activity by activator subunit Vma13p of vacuolar H+-ATPase. J Biol Chem 2000;275:35592-35599.
18708638 Functional characterization of the N-terminal domain of subunit H (Vma13p) of the yeast vacuolar ATPase. J Biol Chem. 2008; [Epub ahead of print]
16141210 Structural and functional separation of the N- and C-terminal domains of the yeast V-ATPase subunit H. J Biol Chem. 2005;280:36978-36985.

CTNNBL

RIX1

RasGEF_N_2

HEAT
7550332 HEAT repeats in the Huntington's disease protein. Nat Genet 1995;11:115-116.
9989501 The structure of the protein phosphatase 2A PR65/A subunit reveals the conformation of its 15 tandemly repeated HEAT motifs. Cell 1999;96:99-110.

HEAT_EZ

Arm
9298899 Three-dimensional structure of the armadillo repeat region of beta-catenin. Cell 1997;90:871-882.
8573337 Signal transduction of beta-catenin. Curr Opin Cell Biol 1995;7:634-640.
9309175 Armadillo and dTCF: a marriage made in the nucleus. Curr Opin Genet Dev 1997;7:459-466.
8259519 Association of the APC tumor suppressor protein with catenins. Science 1993;262:1734-1737.
8259518 Association of the APC gene product with beta-catenin. Science 1993;262:1731-1734.
2261639 The segment polarity gene armadillo encodes a functionally modular protein that is the Drosophila homolog of human plakoglobin. Cell 1990;63:1167-1176.

Domain	Description	Evalue	Bits	GA	Start	End
HEAT_2	HEAT repeats	0.015	5	27.70	115	201
Proteasom_PSMB	Proteasome non-ATPase 26S subunit	9.7E-06	14	19.40	144	286
V-ATPase_H_N	V-ATPase subunit H	0.00048	9	20.10	146	237
Arm	Armadillo/beta-catenin-like repeat	1.6E-05	15	20.60	146	176
HEAT	HEAT repeat	0.013	6	23.50	149	177
RIX1	rRNA processing/ribosome biogenesis	0.00074	9	27.40	150	212
HEAT_EZ	HEAT-like repeat	0.1	3	27.00	152	174
Arm	Armadillo/beta-catenin-like repeat	2.2E-06	17	20.60	181	218
KAP	Kinesin-associated protein (KAP)	4.4E-06	15	19.40	213	323
Arm	Armadillo/beta-catenin-like repeat	1.2E-06	18	20.60	221	259
HEAT_2	HEAT repeats	0.00024	11	27.70	228	285
HEAT_EZ	HEAT-like repeat	8.4E-05	13	27.00	230	258
HEAT	HEAT repeat	0.0034	8	23.50	232	259
V-ATPase_H_N	V-ATPase subunit H	0.0065	5	20.10	233	316
RasGEF_N_2	Rapamycin-insensitive companion of mTOR RasGEF_N domain	0.17	2	27.00	233	271
Cnd1	non-SMC mitotic condensation complex subunit 1	0.00031	10	26.40	238	308
HEAT_EZ	HEAT-like repeat	0.27	2	27.00	255	285
CTNNBL	Catenin-beta-like, Arm-motif containing nuclear	0.018	5	20.90	256	287
Arm	Armadillo/beta-catenin-like repeat	0.0029	7	20.60	268	287
Arm	Armadillo/beta-catenin-like repeat	0.24	1	20.60	311	322
HEAT_2	HEAT repeats	0.013	6	27.70	440	497
KAP	Kinesin-associated protein (KAP)	0.02	3	19.40	451	489
CTNNBL	Catenin-beta-like, Arm-motif containing nuclear	0.12	2	20.90	461	481
Arm	Armadillo/beta-catenin-like repeat	9.4E-08	22	20.60	464	495
HEAT_EZ	HEAT-like repeat	0.66	0	27.00	467	493
Proteasom_PSMB	Proteasome non-ATPase 26S subunit	0.91	-3	19.40	502	578
RIX1	rRNA processing/ribosome biogenesis	0.54	-1	27.40	502	539
Cnd1	non-SMC mitotic condensation complex subunit 1	1	-1	26.40	558	619
Arm	Armadillo/beta-catenin-like repeat	0.053	3	20.60	561	591
HEAT_2	HEAT repeats	0.73	0	27.70	571	590
V-ATPase_H_N	V-ATPase subunit H	0.0027	7	20.10	602	690
RIX1	rRNA processing/ribosome biogenesis	0.00093	9	27.40	658	793
HEAT_2	HEAT repeats	0.0047	7	27.70	721	762
HEAT_EZ	HEAT-like repeat	0.45	1	27.00	723	743
Arm	Armadillo/beta-catenin-like repeat	0.041	4	20.60	723	743
HEAT_2	HEAT repeats	0.0023	8	27.70	724	813
HEAT	HEAT repeat	0.12	3	23.50	724	751
CTNNBL	Catenin-beta-like, Arm-motif containing nuclear	0.29	1	20.90	750	779
Arm	Armadillo/beta-catenin-like repeat	6.5E-09	25	20.60	755	793
Cnd1	non-SMC mitotic condensation complex subunit 1	0.022	4	26.40	760	800
KAP	Kinesin-associated protein (KAP)	8.2E-05	10	19.40	760	817
V-ATPase_H_N	V-ATPase subunit H	0.73	-2	20.10	763	798
RasGEF_N_2	Rapamycin-insensitive companion of mTOR RasGEF_N domain	0.00092	9	27.00	766	803
Arm	Armadillo/beta-catenin-like repeat	0.0035	7	20.60	797	819