c2pfam

AT5G13170.1 :

Domain Description Evalue Bits GA Start End
UPF0640 Uncharacterised protein family UPF0640 5E-05 12 27.00 8 44
MtN3_slv MtN3/saliva family 8.7E-31 94 21.20 13 98
PQ-loop PQ loop repeat 1.9E-07 19 20.30 15 71
Lig_chan Ligand-gated ion channel 0.3 -1 24.80 87 121
Calcyon D1 dopamine receptor-interacting protein (calcyon) 0.85 -2 25.00 102 120
PQ-loop PQ loop repeat 0.048 2 20.30 134 148
MtN3_slv MtN3/saliva family 4.3E-31 95 21.20 135 218
Lig_chan Ligand-gated ion channel 3.2E-05 12 24.80 138 199
PQ-loop PQ loop repeat 0.0029 6 20.30 159 190
Lig_chan Ligand-gated ion channel 0.24 0 24.80 199 234
PQ-loop PQ loop repeat 0.31 -1 20.30 201 214
Calcyon D1 dopamine receptor-interacting protein (calcyon) 3.1E-05 13 25.00 217 256

292

UPF0640
MtN3_slv
PQ-loop
Lig_chan
Calcyon
PQ-loop
MtN3_slv
Lig_chan
PQ-loop
Lig_chan
PQ-loop
Calcyon

References:

PQ-loop
11731489 Novel protein domains and repeats in Drosophila melanogaster: insights into structure, function, and evolution. Genome Res 2001;11:1996-2008.
11150305 The targeting of cystinosin to the lysosomal membrane requires a tyrosine-based signal and a novel sorting motif. J Biol Chem 2001;276:13314-13321.

Calcyon
11929934 D1/D5 dopamine receptors stimulate intracellular calcium release in primary cultures of neocortical and hippocampal neurons. J Neurophysiol 2002;87:2167-2175.
11923911 A genomewide scan for loci involved in attention-deficit/hyperactivity disorder. Am J Hum Genet 2002;70:1183-1196.
12622665 Up-regulation of the D1 dopamine receptor-interacting protein, calcyon, in patients with schizophrenia. Arch Gen Psychiatry 2003;60:311-319.

MtN3_slv
9739134 saliva, a new Drosophila gene expressed in the embryonic salivary glands with homologues in plants and vertebrates. Mech Dev 1998;75:159-162.
8630032 Molecular cloning and characterization of a novel stromal cell-derived cDNA encoding a protein that facilitates gene activation of recombination activating gene (RAG)-1 in human lymphoid progenitors. Biochem Biophys Res Commun 1996;221:744-749.
8634476 Use of a subtractive hybridization approach to identify new Medicago truncatula genes induced during root nodule development. Mol Plant Microbe Interact 1996;9:233-242.

Lig_chan
7878472 Synaptic desensitization of NMDA receptors by calcineurin. Science 1995;267:1510-1512.

UPF0640

Domain	Description	Evalue	Bits	GA	Start	End
UPF0640	Uncharacterised protein family UPF0640	5E-05	12	27.00	8	44
MtN3_slv	MtN3/saliva family	8.7E-31	94	21.20	13	98
PQ-loop	PQ loop repeat	1.9E-07	19	20.30	15	71
Lig_chan	Ligand-gated ion channel	0.3	-1	24.80	87	121
Calcyon	D1 dopamine receptor-interacting protein (calcyon)	0.85	-2	25.00	102	120
PQ-loop	PQ loop repeat	0.048	2	20.30	134	148
MtN3_slv	MtN3/saliva family	4.3E-31	95	21.20	135	218
Lig_chan	Ligand-gated ion channel	3.2E-05	12	24.80	138	199
PQ-loop	PQ loop repeat	0.0029	6	20.30	159	190
Lig_chan	Ligand-gated ion channel	0.24	0	24.80	199	234
PQ-loop	PQ loop repeat	0.31	-1	20.30	201	214
Calcyon	D1 dopamine receptor-interacting protein (calcyon)	3.1E-05	13	25.00	217	256