c2pfam

AT5G14440.1 :

Domain Description Evalue Bits GA Start End
SURF2 Surfeit locus protein 2 (SURF2) 0 153 25.00 11 230
Med19 Mediator of RNA pol II transcription subunit 19 0.00038 9 25.00 114 168
GAGA_bind GAGA binding protein-like family 0.0002 10 21.80 117 173
BUD22 BUD22 3.6E-06 15 37.00 139 287
SR-25 Nuclear RNA-splicing-associated protein 4.9E-06 15 55.00 139 188
Med19 Mediator of RNA pol II transcription subunit 19 0.02 3 25.00 251 284
SR-25 Nuclear RNA-splicing-associated protein 0.01 4 55.00 256 288
GAGA_bind GAGA binding protein-like family 0.036 3 21.80 257 285

292

SURF2
Med19
GAGA_bind
BUD22
SR-25
Med19
SR-25
GAGA_bind

References:

BUD22
11452010 A genomic study of the bipolar bud site selection pattern in Saccharomyces cerevisiae. Mol Biol Cell. 2001;12:2147-2170.

SR-25
10708573 Molecular cloning and expression analysis of a putative nuclear protein, SR-25. Biochem Biophys Res Commun. 2000;269:444-450.
17952876 Dominant negative Rac1 attenuates paclitaxel-induced apoptosis in human melanoma cells through upregulation of heat shock protein 27: a functional proteomic analysis. Proteomics. 2007;7:4112-4122.

Med19
12584197 Identification of mammalian Mediator subunits with similarities to yeast Mediator subunits Srb5, Srb6, Med11, and Rox3. J Biol Chem 2003;278:15123-15127.

GAGA_bind
12177492 Identification of a soybean protein that interacts with GAGA element dinucleotide repeat DNA. Plant Physiol 2002;129:1788-1794.

SURF2
9414319 The comparative genomic structure and sequence of the surfeit gene homologs in the puffer fish Fugu rubripes and their association with CpG-rich islands. Genome Res 1997;7:1138-1152.

Domain	Description	Evalue	Bits	GA	Start	End
SURF2	Surfeit locus protein 2 (SURF2)	0	153	25.00	11	230
Med19	Mediator of RNA pol II transcription subunit 19	0.00038	9	25.00	114	168
GAGA_bind	GAGA binding protein-like family	0.0002	10	21.80	117	173
BUD22	BUD22	3.6E-06	15	37.00	139	287
SR-25	Nuclear RNA-splicing-associated protein	4.9E-06	15	55.00	139	188
Med19	Mediator of RNA pol II transcription subunit 19	0.02	3	25.00	251	284
SR-25	Nuclear RNA-splicing-associated protein	0.01	4	55.00	256	288
GAGA_bind	GAGA binding protein-like family	0.036	3	21.80	257	285