c2pfam

AT5G16210.1 :

Domain Description Evalue Bits GA Start End
KASH_CCD Coiled-coil region of CCDC155 or KASH 0.75 0 38.60 58 97
HALZ Homeobox associated leucine zipper 0.38 2 26.30 68 84
DUF4201 Domain of unknown function (DUF4201) 0.59 0 31.60 70 90
ADIP Afadin- and alpha -actinin-Binding 0.34 2 29.10 71 105
CENP-F_leu_zip Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 0.51 1 30.00 72 108
ERM Ezrin/radixin/moesin family 0.83 0 30.00 76 106
DUF4201 Domain of unknown function (DUF4201) 0.00033 11 31.60 204 290
ADIP Afadin- and alpha -actinin-Binding 0.00013 13 29.10 205 291
ERM Ezrin/radixin/moesin family 1.1E-06 19 30.00 209 311
Leu_zip Leucine zipper 4.2E-06 17 28.20 209 303
UPF0242 Uncharacterised protein family (UPF0242) 7.5E-06 17 23.70 210 297
DUF3450 Protein of unknown function (DUF3450) 0.13 2 26.90 210 241
CENP-F_leu_zip Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 1E-05 16 30.00 211 297
KASH_CCD Coiled-coil region of CCDC155 or KASH 2.4E-05 15 38.60 213 300
Atg14 Vacuolar sorting 38 and autophagy-related subunit 14 6.5E-05 13 33.20 214 302
ATG16 Autophagy protein 16 (ATG16) 2.2E-06 19 35.00 214 327
Bacillus_HBL Bacillus haemolytic enterotoxin (HBL) 0.00077 10 25.00 216 300
TMPIT TMPIT-like protein 0.0021 8 22.10 218 293
HALZ Homeobox associated leucine zipper 0.0039 8 26.30 218 234
GAS Growth-arrest specific micro-tubule binding 0.00046 10 32.30 220 296
DUF1664 Protein of unknown function (DUF1664) 0.0031 8 30.00 222 294
ACCA Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 0.0013 9 21.30 223 304
Spc7 Spc7 kinetochore protein 0.00073 9 34.00 223 334
DUF3450 Protein of unknown function (DUF3450) 6.2E-05 13 26.90 224 301
HALZ Homeobox associated leucine zipper 0.6 1 26.30 257 276
USP8_interact USP8 interacting 0.00024 12 25.00 260 347
GAS Growth-arrest specific micro-tubule binding 0.066 3 32.30 269 370
Pex2_Pex12 Pex2 / Pex12 amino terminal region 0.00089 9 20.90 464 511
MOR2-PAG1_C Cell morphogenesis C-terminal 0.36 1 25.00 474 601
HEAT_2 HEAT repeats 0.0012 10 27.70 532 596
HEAT HEAT repeat 0.00051 11 23.50 533 562
HEAT_EZ HEAT-like repeat 0.18 3 27.00 565 593
HEAT HEAT repeat 9.2E-05 13 23.50 572 599
MOR2-PAG1_C Cell morphogenesis C-terminal 0.43 1 25.00 677 706
MOR2-PAG1_C Cell morphogenesis C-terminal 0.0026 8 25.00 880 937
HEAT HEAT repeat 0.16 3 23.50 896 923
HEAT_2 HEAT repeats 0.002 9 27.70 903 960
HEAT_EZ HEAT-like repeat 0.084 4 27.00 931 958
HEAT HEAT repeat 0.00018 13 23.50 933 962
ADIP Afadin- and alpha -actinin-Binding 0.75 1 29.10 984 1033
Pex2_Pex12 Pex2 / Pex12 amino terminal region 0.33 1 20.90 994 1059
HEAT_2 HEAT repeats 0.5 2 27.70 1039 1071
HEAT_EZ HEAT-like repeat 0.32 2 27.00 1040 1071
HEAT HEAT repeat 0.1 4 23.50 1058 1071

1180

KASH_CCD
HALZ
DUF4201
ADIP
CENP-F_leu_zip
ERM
DUF4201
ADIP
ERM
Leu_zip
UPF0242
DUF3450
CENP-F_leu_zip
KASH_CCD
Atg14
ATG16
Bacillus_HBL
TMPIT
HALZ
GAS
DUF1664
ACCA
Spc7
DUF3450
HALZ
USP8_interact
GAS
Pex2_Pex12
MOR2-PAG1_C
HEAT_2
HEAT
HEAT_EZ
HEAT
MOR2-PAG1_C
MOR2-PAG1_C
HEAT
HEAT_2
HEAT_EZ
HEAT
ADIP
Pex2_Pex12
HEAT_2
HEAT_EZ
HEAT

References:

Atg14

ERM
9472040 Ezrin/radixin/moesin (ERM) proteins bind to a positively charged amino acid cluster in the juxta-membrane cytoplasmic domain of CD44, CD43, and ICAM-2. J Cell Biol 1998;140:885-895.

UPF0242

ADIP
12446711 ADIP, a novel Afadin- and alpha-actinin-binding protein localized at cell-cell adherens junctions. J Biol Chem. 2003;278:4103-4111.
17486116 Gamma-tubulin complex-mediated anchoring of spindle microtubules to spindle-pole bodies requires Msd1 in fission yeast. Nat Cell Biol. 2007;9:646-653.

KASH_CCD

Leu_zip

DUF4201

HEAT_2

GAS

Bacillus_HBL
12039781 Enterotoxin production in natural isolates of Bacillaceae outside the Bacillus cereus group. Appl Environ Microbiol 2002;68:3147-3151.

MOR2-PAG1_C

Pex2_Pex12

ACCA
10470374 The regulation of acetyl-CoA carboxylase--a potential target for the action of hypolipidemic agents. Adv Enzyme Regul 1999;39:205-234.

HEAT_EZ

ATG16
10406794 Apg16p is required for the function of the Apg12p-Apg5p conjugate in the yeast autophagy pathway. EMBO J. 1999;18:3888-3896.
17012802 Expression, purification and crystallization of the Atg5-Atg16 complex essential for autophagy. Acta Crystallograph Sect F Struct Biol Cryst Commun. 2006;62:1021-1023.

DUF1664

DUF3450

USP8_interact

CENP-F_leu_zip
7542657 CENP-F is a protein of the nuclear matrix that assembles onto kinetochores at late G2 and is rapidly degraded after mitosis. J Cell Biol. 1995;130:507-518.
14555653 LEK1 is a potential inhibitor of pocket protein-mediated cellular processes. J Biol Chem. 2004;279:664-676.

HEAT
7550332 HEAT repeats in the Huntington's disease protein. Nat Genet 1995;11:115-116.
9989501 The structure of the protein phosphatase 2A PR65/A subunit reveals the conformation of its 15 tandemly repeated HEAT motifs. Cell 1999;96:99-110.

TMPIT

Spc7
15371542 The fission yeast kinetochore component Spc7 associates with the EB1 family member Mal3 and is required for kinetochore-spindle association. Mol Biol Cell 2004;15:5255-5267.

HALZ

Domain	Description	Evalue	Bits	GA	Start	End
KASH_CCD	Coiled-coil region of CCDC155 or KASH	0.75	0	38.60	58	97
HALZ	Homeobox associated leucine zipper	0.38	2	26.30	68	84
DUF4201	Domain of unknown function (DUF4201)	0.59	0	31.60	70	90
ADIP	Afadin- and alpha -actinin-Binding	0.34	2	29.10	71	105
CENP-F_leu_zip	Leucine-rich repeats of kinetochore protein Cenp-F/LEK1	0.51	1	30.00	72	108
ERM	Ezrin/radixin/moesin family	0.83	0	30.00	76	106
DUF4201	Domain of unknown function (DUF4201)	0.00033	11	31.60	204	290
ADIP	Afadin- and alpha -actinin-Binding	0.00013	13	29.10	205	291
ERM	Ezrin/radixin/moesin family	1.1E-06	19	30.00	209	311
Leu_zip	Leucine zipper	4.2E-06	17	28.20	209	303
UPF0242	Uncharacterised protein family (UPF0242)	7.5E-06	17	23.70	210	297
DUF3450	Protein of unknown function (DUF3450)	0.13	2	26.90	210	241
CENP-F_leu_zip	Leucine-rich repeats of kinetochore protein Cenp-F/LEK1	1E-05	16	30.00	211	297
KASH_CCD	Coiled-coil region of CCDC155 or KASH	2.4E-05	15	38.60	213	300
Atg14	Vacuolar sorting 38 and autophagy-related subunit 14	6.5E-05	13	33.20	214	302
ATG16	Autophagy protein 16 (ATG16)	2.2E-06	19	35.00	214	327
Bacillus_HBL	Bacillus haemolytic enterotoxin (HBL)	0.00077	10	25.00	216	300
TMPIT	TMPIT-like protein	0.0021	8	22.10	218	293
HALZ	Homeobox associated leucine zipper	0.0039	8	26.30	218	234
GAS	Growth-arrest specific micro-tubule binding	0.00046	10	32.30	220	296
DUF1664	Protein of unknown function (DUF1664)	0.0031	8	30.00	222	294
ACCA	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit	0.0013	9	21.30	223	304
Spc7	Spc7 kinetochore protein	0.00073	9	34.00	223	334
DUF3450	Protein of unknown function (DUF3450)	6.2E-05	13	26.90	224	301
HALZ	Homeobox associated leucine zipper	0.6	1	26.30	257	276
USP8_interact	USP8 interacting	0.00024	12	25.00	260	347
GAS	Growth-arrest specific micro-tubule binding	0.066	3	32.30	269	370
Pex2_Pex12	Pex2 / Pex12 amino terminal region	0.00089	9	20.90	464	511
MOR2-PAG1_C	Cell morphogenesis C-terminal	0.36	1	25.00	474	601
HEAT_2	HEAT repeats	0.0012	10	27.70	532	596
HEAT	HEAT repeat	0.00051	11	23.50	533	562
HEAT_EZ	HEAT-like repeat	0.18	3	27.00	565	593
HEAT	HEAT repeat	9.2E-05	13	23.50	572	599
MOR2-PAG1_C	Cell morphogenesis C-terminal	0.43	1	25.00	677	706
MOR2-PAG1_C	Cell morphogenesis C-terminal	0.0026	8	25.00	880	937
HEAT	HEAT repeat	0.16	3	23.50	896	923
HEAT_2	HEAT repeats	0.002	9	27.70	903	960
HEAT_EZ	HEAT-like repeat	0.084	4	27.00	931	958
HEAT	HEAT repeat	0.00018	13	23.50	933	962
ADIP	Afadin- and alpha -actinin-Binding	0.75	1	29.10	984	1033
Pex2_Pex12	Pex2 / Pex12 amino terminal region	0.33	1	20.90	994	1059
HEAT_2	HEAT repeats	0.5	2	27.70	1039	1071
HEAT_EZ	HEAT-like repeat	0.32	2	27.00	1040	1071
HEAT	HEAT repeat	0.1	4	23.50	1058	1071