c2pfam

AT5G19620.1 :

Domain Description Evalue Bits GA Start End
Baculo_PEP_C Baculovirus polyhedron envelope protein, PEP, C terminus 0.00011 11 38.00 28 60
POTRA_2 POTRA domain, ShlB-type 6.4E-05 11 20.70 245 313
POTRA Surface antigen variable number repeat 5.9E-05 12 21.30 253 300
POTRA Surface antigen variable number repeat 5.5E-05 12 21.30 335 395
Omp85 Omp85 superfamily domain 0 176 20.70 429 731
ShlB Haemolysin secretion/activation protein ShlB/FhaC/HecB 9.5E-06 14 19.90 620 675

732

Baculo_PEP_C
POTRA_2
POTRA
POTRA
Omp85
ShlB

References:

ShlB
14688146 Activation of Serratia marcescens hemolysin through a conformational change. Infect Immun 2004;72:611-614.
15119822 Type V protein secretion: simplicity gone awry?. Curr Issues Mol Biol 2004;6:111-124.
11309114 Two-partner secretion in Gram-negative bacteria: a thrifty, specific pathway for large virulence proteins. Mol Microbiol 2001;40:306-313.

POTRA_2
14559180 POTRA: a conserved domain in the FtsQ family and a class of beta-barrel outer membrane proteins. Trends Biochem Sci 2003;28:523-526.

POTRA

Baculo_PEP_C
8176372 Orgyia pseudotsugata baculovirus p10 and polyhedron envelope protein genes: analysis of their relative expression levels and role in polyhedron structure. J Gen Virol 1994;75:1115-1123.

Omp85

Domain	Description	Evalue	Bits	GA	Start	End
Baculo_PEP_C	Baculovirus polyhedron envelope protein, PEP, C terminus	0.00011	11	38.00	28	60
POTRA_2	POTRA domain, ShlB-type	6.4E-05	11	20.70	245	313
POTRA	Surface antigen variable number repeat	5.9E-05	12	21.30	253	300
POTRA	Surface antigen variable number repeat	5.5E-05	12	21.30	335	395
Omp85	Omp85 superfamily domain	0	176	20.70	429	731
ShlB	Haemolysin secretion/activation protein ShlB/FhaC/HecB	9.5E-06	14	19.90	620	675