c2pfam

AT5G19960.1 :

Domain Description Evalue Bits GA Start End
RRM_7 RNA recognition motif 1.5E-08 24 27.00 8 61
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3.1E-24 74 20.70 9 77
RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.00014 11 27.00 10 79
ATG16 Autophagy protein 16 (ATG16) 2E-05 14 35.00 213 318
EzrA Septation ring formation regulator, EzrA 0.00012 9 30.00 227 314
Nup188_C Nuclear pore protein NUP188 C-terminal domain 0.00066 8 25.40 227 278
GAS Growth-arrest specific micro-tubule binding 9.8E-05 11 32.30 237 316
GED Dynamin GTPase effector domain 0.00018 11 20.60 248 299

337

RRM_7
RRM_1
RRM_5
ATG16
EzrA
Nup188_C
GAS
GED

References:

RRM_7

RRM_5

GAS

Nup188_C

ATG16
10406794 Apg16p is required for the function of the Apg12p-Apg5p conjugate in the yeast autophagy pathway. EMBO J. 1999;18:3888-3896.
17012802 Expression, purification and crystallization of the Atg5-Atg16 complex essential for autophagy. Acta Crystallograph Sect F Struct Biol Cryst Commun. 2006;62:1021-1023.

RRM_1
8290338 Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. Nucleic Acid Res 1993;21:5803-5816.

GED

EzrA
10449747 Identification and characterization of a negative regulator of FtsZ ring formation in Bacillus subtilis. Proc Natl Acad Sci U S A 1999;96:9642-9647.

Domain	Description	Evalue	Bits	GA	Start	End
RRM_7	RNA recognition motif	1.5E-08	24	27.00	8	61
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	3.1E-24	74	20.70	9	77
RRM_5	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.00014	11	27.00	10	79
ATG16	Autophagy protein 16 (ATG16)	2E-05	14	35.00	213	318
EzrA	Septation ring formation regulator, EzrA	0.00012	9	30.00	227	314
Nup188_C	Nuclear pore protein NUP188 C-terminal domain	0.00066	8	25.40	227	278
GAS	Growth-arrest specific micro-tubule binding	9.8E-05	11	32.30	237	316
GED	Dynamin GTPase effector domain	0.00018	11	20.60	248	299