AT5G20730.1 :
Domain
Description
Evalue
Bits
GA
Start
End
B3
B3 DNA binding domain
3.9E-24
73
30.10
127
228
Auxin_resp
Auxin response factor
1.1E-35
110
21.10
253
336
PB1
PB1 domain
0.25
0
20.80
973
986
AUX_IAA
AUX/IAA family
2.3E-13
39
20.80
1036
1124
PB1
PB1 domain
6E-06
14
20.80
1042
1115
B3
B3 DNA binding domain
0.073
1
30.10
1075
1110
1165
B3
Auxin_resp
PB1
AUX_IAA
PB1
B3
References:
AUX_IAA
9482737
The Arabidopsis gene MONOPTEROS encodes a transcription factor mediating embryo axis formation and vascular development.
EMBO J 1998;17:1405-1411.
PB1
8931154
Novel domains in NADPH oxidase subunits, sorting nexins, and PtdIns 3-kinases: binding partners of SH3 domains?
Protein Sci 1996;5:2353-2357.
7759517
Components of a new human protein kinase signal transduction pathway.
J Biol Chem 1995;270:12665-12669.
7499418
Isolation of MEK5 and differential expression of alternatively spliced forms.
J Biol Chem 1995;270:28897-28902.
B3
9862967
RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants.
Nucleic Acids Res 1999;27:470-478.
9188533
ARF1, a transcription factor that binds to auxin response elements.
Science 1997;276:1865-1868.
9165754
The conserved B3 domain of VIVIPAROUS1 has a cooperative DNA binding activity.
Plant Cell 1997;9:799-807.
Auxin_resp
11922106
Auxin response factor family in rice.
Genes Genet Syst 2001;76:373-380.