c2pfam

AT5G22000.1 :

Domain Description Evalue Bits GA Start End
zf-rbx1 RING-H2 zinc finger domain 8E-10 29 31.00 28 73
zf-Nse Zinc-finger of the MIZ type in Nse subunit 0.00029 11 20.70 28 73
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 1.1E-06 19 21.40 30 80
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 0.001 9 27.00 31 78
zf-RING_2 Ring finger domain 3E-11 33 27.30 32 73
zf-C3HC4_4 zinc finger of C3HC4-type, RING 0.011 6 30.00 33 73
zf-RING_5 zinc-RING finger domain 8.3E-07 19 27.90 33 73
zf-RING_UBOX RING-type zinc-finger 1.2E-06 18 25.20 33 71
zf-RING_11 RING-like zinc finger 6.9E-10 28 27.00 33 60
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 2.9E-09 27 27.00 33 73
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 1.2E-08 25 21.00 33 73
zf-C3H2C3 Zinc-finger 0.012 6 27.00 50 73
Herpes_DNAp_acc Herpes DNA replication accessory factor 0.0077 5 25.00 148 244

375

zf-rbx1
zf-Nse
zf-ANAPC11
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-RING_UBOX
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-C3H2C3
Herpes_DNAp_acc

References:

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

Herpes_DNAp_acc
10882068 The crystal structure of an unusual processivity factor, herpes simplex virus UL42, bound to the C terminus of its cognate polymerase. Mol Cell 2000;5:267-278.
9934686 Identification of transactivator and nuclear localization domains in the Epstein-Barr virus DNA polymerase accessory protein, BMRF1. J Gen Virol 1999;80:69-74.

zf-ANAPC11

zf-RING_UBOX

zf-rbx1

zf-RING_5

zf-RING_2

zf-Nse
12966087 Novel essential DNA repair proteins Nse1 and Nse2 are subunits of the fission yeast Smc5-Smc6 complex. J Biol Chem 2003;278:45460-45467.

zf-RING_11

zf-C3HC4_4

zf-C3HC4_3

zf-C3HC4_2

zf-C3H2C3

Domain	Description	Evalue	Bits	GA	Start	End
zf-rbx1	RING-H2 zinc finger domain	8E-10	29	31.00	28	73
zf-Nse	Zinc-finger of the MIZ type in Nse subunit	0.00029	11	20.70	28	73
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	1.1E-06	19	21.40	30	80
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	0.001	9	27.00	31	78
zf-RING_2	Ring finger domain	3E-11	33	27.30	32	73
zf-C3HC4_4	zinc finger of C3HC4-type, RING	0.011	6	30.00	33	73
zf-RING_5	zinc-RING finger domain	8.3E-07	19	27.90	33	73
zf-RING_UBOX	RING-type zinc-finger	1.2E-06	18	25.20	33	71
zf-RING_11	RING-like zinc finger	6.9E-10	28	27.00	33	60
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	2.9E-09	27	27.00	33	73
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	1.2E-08	25	21.00	33	73
zf-C3H2C3	Zinc-finger	0.012	6	27.00	50	73
Herpes_DNAp_acc	Herpes DNA replication accessory factor	0.0077	5	25.00	148	244