c2pfam

AT5G22310.1 :

Domain Description Evalue Bits GA Start End
MRP-L28 Mitochondrial ribosomal protein L28 7.3E-05 12 24.10 147 230
Macoilin Transmembrane protein 0.00021 9 32.00 187 336
LMBR1 LMBR1-like membrane protein 0.0051 5 24.20 233 321
XkdW XkdW protein 0.0089 5 20.60 242 279
DUF3492 Domain of unknown function (DUF3492) 0.0017 7 23.30 251 362
CoA_binding_3 CoA-binding domain 0.00018 11 25.00 257 336
MRP-L28 Mitochondrial ribosomal protein L28 0.31 0 24.10 277 343
XkdW XkdW protein 0.0096 5 20.60 286 316
Secretin_N Bacterial type II/III secretion system short domain 0.00034 10 24.20 346 407

481

MRP-L28
Macoilin
LMBR1
XkdW
DUF3492
CoA_binding_3
MRP-L28
XkdW
Secretin_N

References:

Macoilin
17341690 An improved method for the analysis of membrane proteins by mass spectrometry. Physiol Genomics. 2007; [Epub ahead of print]

MRP-L28
12125055 Genomic differences between Candida glabrata and Saccharomyces cerevisiae around the MRPL28 and GCN3 loci. Yeast. 2002;19:991-994.
2060626 Extended N-terminal sequencing of proteins of the large ribosomal subunit from yeast mitochondria. FEBS Lett. 1991;284:51-56.

XkdW

Secretin_N

CoA_binding_3

DUF3492

LMBR1
12032320 Disruption of a long-range cis-acting regulator for Shh causes preaxial polydactyly. Proc Natl Acad Sci U S A 2002;99:7548-7553.
11287427 Molecular cloning of a novel lipocalin-1 interacting human cell membrane receptor using phage display. J Biol Chem 2001;276:20206-20212.
11090342 Acheiropodia is caused by a genomic deletion in C7orf2, the human orthologue of the Lmbr1 gene. Am J Hum Genet 2001;68:38-45.

Domain	Description	Evalue	Bits	GA	Start	End
MRP-L28	Mitochondrial ribosomal protein L28	7.3E-05	12	24.10	147	230
Macoilin	Transmembrane protein	0.00021	9	32.00	187	336
LMBR1	LMBR1-like membrane protein	0.0051	5	24.20	233	321
XkdW	XkdW protein	0.0089	5	20.60	242	279
DUF3492	Domain of unknown function (DUF3492)	0.0017	7	23.30	251	362
CoA_binding_3	CoA-binding domain	0.00018	11	25.00	257	336
MRP-L28	Mitochondrial ribosomal protein L28	0.31	0	24.10	277	343
XkdW	XkdW protein	0.0096	5	20.60	286	316
Secretin_N	Bacterial type II/III secretion system short domain	0.00034	10	24.20	346	407