c2pfam

AT5G23760.1 :

Domain Description Evalue Bits GA Start End
RICTOR_N Rapamycin-insensitive companion of mTOR, N-term 3.8E-05 12 28.50 5 97
HMA Heavy-metal-associated domain 1.4E-06 18 21.10 7 63
Syja_N SacI homology domain 3.2E-05 12 20.40 30 96
Peroxin-13_N Peroxin 13, N-terminal region 2.3E-05 14 20.90 33 98
U1snRNP70_N U1 small nuclear ribonucleoprotein of 70kDa MW N terminal 0.00087 9 21.90 45 98
DUF809 Protein of unknown function (DUF809) 0.0037 7 25.00 52 100
Topoisom_I_N Eukaryotic DNA topoisomerase I, DNA binding fragment 6.6E-06 15 25.00 56 101
Cytomega_UL84 Cytomegalovirus UL84 protein 0.0029 5 25.00 75 97

103

RICTOR_N
HMA
Syja_N
Peroxin-13_N
U1snRNP70_N
DUF809
Topoisom_I_N
Cytomega_UL84

References:

DUF809

Peroxin-13_N
10087260 Involvement of Pex13p in Pex14p localization and peroxisomal targeting signal 2-dependent protein import into peroxisomes. J Cell Biol 1999;144:1151-1162.

Syja_N
9388224 Synaptojanin 2, a novel synaptojanin isoform with a distinct targeting domain and expression pattern. J Biol Chem 1997;272:30817-30821.

U1snRNP70_N
19325628 Crystal structure of human spliceosomal U1 snRNP at 5.5 A resolution. Nature. 2009;458:475-480.

Topoisom_I_N
7770916 The mechanisms of DNA topoisomerases. Trends Biochem Sci 1995;20:156-160.
9488644 Crystal structures of human topoisomerase I in covalent and noncovalent complexes with DNA. Science 1998;279:1504-1513.

HMA
10404590 Crystal structure of the Atx1 metallochaperone protein at 1.02 A resolution. Structure Fold Des 1999;7:605-617.

Cytomega_UL84
12610148 A nonconventional nuclear localization signal within the UL84 protein of human cytomegalovirus mediates nuclear import via the importin alpha/beta pathway. J Virol 2003;77:3734-3748.

RICTOR_N

Domain	Description	Evalue	Bits	GA	Start	End
RICTOR_N	Rapamycin-insensitive companion of mTOR, N-term	3.8E-05	12	28.50	5	97
HMA	Heavy-metal-associated domain	1.4E-06	18	21.10	7	63
Syja_N	SacI homology domain	3.2E-05	12	20.40	30	96
Peroxin-13_N	Peroxin 13, N-terminal region	2.3E-05	14	20.90	33	98
U1snRNP70_N	U1 small nuclear ribonucleoprotein of 70kDa MW N terminal	0.00087	9	21.90	45	98
DUF809	Protein of unknown function (DUF809)	0.0037	7	25.00	52	100
Topoisom_I_N	Eukaryotic DNA topoisomerase I, DNA binding fragment	6.6E-06	15	25.00	56	101
Cytomega_UL84	Cytomegalovirus UL84 protein	0.0029	5	25.00	75	97