c2pfam

AT5G24020.1 :

Domain Description Evalue Bits GA Start End
Zeta_toxin Zeta toxin 0.00029 10 20.10 53 96
ParA ParA/MinD ATPase like 9.600001E-22 67 21.10 59 297
AAA_31 AAA domain 5.2E-18 55 27.00 59 215
MipZ ATPase MipZ 4E-10 29 20.70 60 194
ArsA_ATPase Anion-transporting ATPase 2.6E-08 23 21.60 61 96
CBP_BcsQ Cellulose biosynthesis protein BcsQ 2.6E-05 13 21.30 61 95
AAA_25 AAA domain 3.7E-05 13 27.00 61 181
AAA_26 AAA domain 0.13 2 27.00 61 84
CbiA CobQ/CobB/MinD/ParA nucleotide binding domain 2.5E-25 79 21.70 61 278
SRP54 SRP54-type protein, GTPase domain 0.00021 11 20.50 61 96
Fer4_NifH 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 3.6E-10 29 20.10 64 304
CBP_BcsQ Cellulose biosynthesis protein BcsQ 0.0043 6 21.30 173 209
ArsA_ATPase Anion-transporting ATPase 0.032 3 21.60 201 240
AAA_26 AAA domain 0.00027 10 27.00 221 272

326

Zeta_toxin
ParA
AAA_31
MipZ
ArsA_ATPase
CBP_BcsQ
AAA_25
AAA_26
CbiA
SRP54
Fer4_NifH
CBP_BcsQ
ArsA_ATPase
AAA_26

References:

SRP54
9002525 Crystal structure of the NG domain from the signal-recognition particle receptor FtsY. Nature 1997;385:365-368.

ParA
2149583 A family of ATPases involved in active partitioning of diverse bacterial plasmids. Mol Microbiol 1990;4:1455-1463.
15728363 The eukaryotic P loop NTPase Nbp35: an essential component of the cytosolic and nuclear iron-sulfur protein assembly machinery. Proc Natl Acad Sci U S A. 2005;102:3266-3271.

AAA_31

Fer4_NifH

Zeta_toxin
12571357 Crystal structure of the plasmid maintenance system epsilon/zeta: functional mechanism of toxin zeta and inactivation by epsilon 2 zeta 2 complex formation. Proc Natl Acad Sci U S A 2003;100:1661-1666.

ArsA_ATPase
1704144 The plasmid-encoded arsenical resistance pump: an anion-translocating ATPase. Res Microbiol 1990;141:336-341.

AAA_26

AAA_25

CbiA
9742225 Cobalamin (vitamin B12) biosynthesis: identification and characterization of a Bacillus megaterium cobI operon. Biochem J 1998;335:159-166.
9742226 Cobalamin (vitamin B12) biosynthesis: functional characterization of the Bacillus megaterium cbi genes required to convert uroporphyrinogen III into cobyrinic acid a,c-diamide. Biochem J 1998;335:167-173.
7635831 Identification and sequence analysis of genes involved in late steps in cobalamin (vitamin B12) synthesis in Rhodobacter capsulatus. J Bacteriol 1995;177:4481-4487.
8501034 Characterization of the cobalamin (vitamin B12) biosynthetic genes of Salmonella typhimurium. J Bacteriol 1993;175:3303-3316.
10966576 The synthetase domains of cobalamin biosynthesis amidotransferases cobB and cobQ belong to a new family of ATP-dependent amidoligases, related to dethiobiotin synthetase. Proteins 2000;41:238-247.
2149583 A family of ATPases involved in active partitioning of diverse bacterial plasmids. Mol Microbiol 1990;4:1455-1463.

CBP_BcsQ

MipZ
16839883 MipZ, a spatial regulator coordinating chromosome segregation with cell division in Caulobacter. Cell. 2006;126:147-162.

Domain	Description	Evalue	Bits	GA	Start	End
Zeta_toxin	Zeta toxin	0.00029	10	20.10	53	96
ParA	ParA/MinD ATPase like	9.600001E-22	67	21.10	59	297
AAA_31	AAA domain	5.2E-18	55	27.00	59	215
MipZ	ATPase MipZ	4E-10	29	20.70	60	194
ArsA_ATPase	Anion-transporting ATPase	2.6E-08	23	21.60	61	96
CBP_BcsQ	Cellulose biosynthesis protein BcsQ	2.6E-05	13	21.30	61	95
AAA_25	AAA domain	3.7E-05	13	27.00	61	181
AAA_26	AAA domain	0.13	2	27.00	61	84
CbiA	CobQ/CobB/MinD/ParA nucleotide binding domain	2.5E-25	79	21.70	61	278
SRP54	SRP54-type protein, GTPase domain	0.00021	11	20.50	61	96
Fer4_NifH	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	3.6E-10	29	20.10	64	304
CBP_BcsQ	Cellulose biosynthesis protein BcsQ	0.0043	6	21.30	173	209
ArsA_ATPase	Anion-transporting ATPase	0.032	3	21.60	201	240
AAA_26	AAA domain	0.00027	10	27.00	221	272