c2pfam

AT1G24620.1 :

Domain Description Evalue Bits GA Start End
DUF5580 Family of unknown function (DUF5580) 0.00011 11 83.40 27 102
Caleosin Caleosin related protein 0.0082 6 20.60 30 63
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.00039 10 21.30 32 95
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 2.1E-05 15 21.40 36 95
EF-hand_7 EF-hand domain pair 2.7E-16 50 30.00 37 96
EF-hand_1 EF hand 1.9E-11 33 25.40 37 65
EF-hand_6 EF-hand domain 1.2E-10 31 25.00 37 66
EF-hand_8 EF-hand domain pair 7.3E-06 16 28.00 37 57
EF-hand_5 EF hand 1.6E-11 34 25.90 38 62
EF-hand_9 EF-hand domain 2E-05 15 37.00 39 95
Poly_export Polysaccharide biosynthesis/export protein 0.034 5 20.60 40 62
Dockerin_1 Dockerin type I repeat 5.5E-05 13 20.50 43 58
Dockerin_1 Dockerin type I repeat 1.8E-05 15 20.50 45 134
SUB1_ProdP9 SUB1 protease Prodomain ProdP9 0.0019 8 25.00 49 93
DUF1456 Protein of unknown function (DUF1456) 0.016 6 21.70 53 84
EF-hand_8 EF-hand domain pair 8.5E-10 28 28.00 60 97
IF2_N Translation initiation factor IF-2, N-terminal region 0.88 0 20.60 63 82
Caleosin Caleosin related protein 0.082 3 20.60 71 108
EF-hand_1 EF hand 6.4E-10 28 25.40 73 97
EF-hand_6 EF-hand domain 9.6E-05 12 25.00 74 96
EF-hand_5 EF hand 1.7E-06 18 25.90 77 97
Poly_export Polysaccharide biosynthesis/export protein 0.011 6 20.60 85 118
IF2_N Translation initiation factor IF-2, N-terminal region 0.0044 7 20.60 101 141
DUF1456 Protein of unknown function (DUF1456) 0.061 4 21.70 105 137
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 0.00057 10 21.40 107 167
SUB1_ProdP9 SUB1 protease Prodomain ProdP9 0.062 3 25.00 108 152
EF-hand_7 EF-hand domain pair 1.7E-16 51 30.00 109 171
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.15 2 21.30 110 136
EF-hand_5 EF hand 1.3E-08 24 25.90 111 134
EF-hand_6 EF-hand domain 1E-09 28 25.00 111 139
EF-hand_1 EF hand 4.7E-10 29 25.40 111 138
EF-hand_8 EF-hand domain pair 0.00012 12 28.00 113 136
EF-hand_9 EF-hand domain 3E-05 15 37.00 114 173
Caleosin Caleosin related protein 0.033 4 20.60 115 141
EF-hand_8 EF-hand domain pair 1E-11 35 28.00 123 173
EF-hand_1 EF hand 4.6E-11 32 25.40 146 173
IF2_N Translation initiation factor IF-2, N-terminal region 0.25 1 20.60 147 168
EF-hand_6 EF-hand domain 7E-08 22 25.00 154 173
EF-hand_5 EF hand 4.6E-08 23 25.90 154 171
EF-hand_4 Cytoskeletal-regulatory complex EF hand 4.8E-05 13 21.30 154 173

186

DUF5580
Caleosin
EF-hand_4
SPARC_Ca_bdg
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
Poly_export
Dockerin_1
Dockerin_1
SUB1_ProdP9
DUF1456
EF-hand_8
IF2_N
Caleosin
EF-hand_1
EF-hand_6
EF-hand_5
Poly_export
IF2_N
DUF1456
SPARC_Ca_bdg
SUB1_ProdP9
EF-hand_7
EF-hand_4
EF-hand_5
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_9
Caleosin
EF-hand_8
EF-hand_1
IF2_N
EF-hand_6
EF-hand_5
EF-hand_4

References:

DUF5580

EF-hand_9

SPARC_Ca_bdg
16121393 The C-terminal Ca2+-binding domain of SPARC confers anti-spreading activity to human urothelial cells. J Cell Physiol. 2006;206:211-220.

EF-hand_7

EF-hand_6

EF-hand_5

EF-hand_4

EF-hand_1

EF-hand_8

IF2_N
1764105 Tandem translation of E. coli initiation factor IF2 beta: purification and characterization in vitro of two active forms. Biochem Biophys Res Commun 1991;181:1572-1579.
12600987 A conserved structural motif at the N-terminus of bacterial translation initiation factor IF2. 0;0:0-0.

Caleosin
11171180 New insights into the mechanisms of lipid-body biogenesis in plants and other organisms. Biochem Soc Trans 2000;28:710-711.

Dockerin_1
10390637 The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides [In Process Citation] Trends Microbiol 1999;7:275-281.
10898940 Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy. Arch Biochem Biophys 2000;379:237-244.

SUB1_ProdP9

DUF1456

Poly_export
8759852 Organization of the Escherichia coli K-12 gene cluster responsible for production of the extracellular polysaccharide colanic acid. J Bacteriol 1996;178:4885-4893.

Domain	Description	Evalue	Bits	GA	Start	End
DUF5580	Family of unknown function (DUF5580)	0.00011	11	83.40	27	102
Caleosin	Caleosin related protein	0.0082	6	20.60	30	63
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.00039	10	21.30	32	95
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	2.1E-05	15	21.40	36	95
EF-hand_7	EF-hand domain pair	2.7E-16	50	30.00	37	96
EF-hand_1	EF hand	1.9E-11	33	25.40	37	65
EF-hand_6	EF-hand domain	1.2E-10	31	25.00	37	66
EF-hand_8	EF-hand domain pair	7.3E-06	16	28.00	37	57
EF-hand_5	EF hand	1.6E-11	34	25.90	38	62
EF-hand_9	EF-hand domain	2E-05	15	37.00	39	95
Poly_export	Polysaccharide biosynthesis/export protein	0.034	5	20.60	40	62
Dockerin_1	Dockerin type I repeat	5.5E-05	13	20.50	43	58
Dockerin_1	Dockerin type I repeat	1.8E-05	15	20.50	45	134
SUB1_ProdP9	SUB1 protease Prodomain ProdP9	0.0019	8	25.00	49	93
DUF1456	Protein of unknown function (DUF1456)	0.016	6	21.70	53	84
EF-hand_8	EF-hand domain pair	8.5E-10	28	28.00	60	97
IF2_N	Translation initiation factor IF-2, N-terminal region	0.88	0	20.60	63	82
Caleosin	Caleosin related protein	0.082	3	20.60	71	108
EF-hand_1	EF hand	6.4E-10	28	25.40	73	97
EF-hand_6	EF-hand domain	9.6E-05	12	25.00	74	96
EF-hand_5	EF hand	1.7E-06	18	25.90	77	97
Poly_export	Polysaccharide biosynthesis/export protein	0.011	6	20.60	85	118
IF2_N	Translation initiation factor IF-2, N-terminal region	0.0044	7	20.60	101	141
DUF1456	Protein of unknown function (DUF1456)	0.061	4	21.70	105	137
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	0.00057	10	21.40	107	167
SUB1_ProdP9	SUB1 protease Prodomain ProdP9	0.062	3	25.00	108	152
EF-hand_7	EF-hand domain pair	1.7E-16	51	30.00	109	171
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.15	2	21.30	110	136
EF-hand_5	EF hand	1.3E-08	24	25.90	111	134
EF-hand_6	EF-hand domain	1E-09	28	25.00	111	139
EF-hand_1	EF hand	4.7E-10	29	25.40	111	138
EF-hand_8	EF-hand domain pair	0.00012	12	28.00	113	136
EF-hand_9	EF-hand domain	3E-05	15	37.00	114	173
Caleosin	Caleosin related protein	0.033	4	20.60	115	141
EF-hand_8	EF-hand domain pair	1E-11	35	28.00	123	173
EF-hand_1	EF hand	4.6E-11	32	25.40	146	173
IF2_N	Translation initiation factor IF-2, N-terminal region	0.25	1	20.60	147	168
EF-hand_6	EF-hand domain	7E-08	22	25.00	154	173
EF-hand_5	EF hand	4.6E-08	23	25.90	154	171
EF-hand_4	Cytoskeletal-regulatory complex EF hand	4.8E-05	13	21.30	154	173