c2pfam

AT5G27570.1 :

Domain Description Evalue Bits GA Start End
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.1 2 22.90 118 170
IKI3 IKI3 family 0.018 2 19.30 137 158
eIF2A Eukaryotic translation initiation factor eIF2A 0.0091 5 20.50 153 203
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 2.8E-09 26 22.90 168 226
IKI3 IKI3 family 0.0015 5 19.30 169 202
WD40 WD domain, G-beta repeat 0.021 5 21.00 174 201
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.079 1 29.50 193 212
WD40 WD domain, G-beta repeat 0.00019 11 21.00 207 238
YajC Preprotein translocase subunit 8.1E-05 11 20.70 215 245
WD40 WD domain, G-beta repeat 1.4E-09 27 21.00 250 285
eIF2A Eukaryotic translation initiation factor eIF2A 2.1E-06 17 20.50 254 369
IKI3 IKI3 family 0.075 -1 19.30 255 285
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 7.4E-06 15 22.90 255 287
WD40 WD domain, G-beta repeat 2.8E-07 20 21.00 297 337
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 1.8E-06 17 22.90 298 360
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 0.032 2 29.50 317 317
WD40 WD domain, G-beta repeat 0.18 2 21.00 343 379
eIF2A Eukaryotic translation initiation factor eIF2A 0.017 4 20.50 350 398
Ge1_WD40 WD40 region of Ge1, enhancer of mRNA-decapping protein 8.1E-05 10 29.50 387 426
WD40 WD domain, G-beta repeat 4.7E-07 19 21.00 387 422
ANAPC4_WD40 Anaphase-promoting complex subunit 4 WD40 domain 0.12 2 22.90 390 423

450

ANAPC4_WD40
IKI3
eIF2A
ANAPC4_WD40
IKI3
WD40
Ge1_WD40
WD40
YajC
WD40
eIF2A
IKI3
ANAPC4_WD40
WD40
ANAPC4_WD40
Ge1_WD40
WD40
eIF2A
Ge1_WD40
WD40
ANAPC4_WD40

References:

ANAPC4_WD40

Ge1_WD40

IKI3
10024884 Elongator, a multisubunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation. Mol Cell 1999;3:109-118.

WD40
8090199 The ancient regulatory-protein family of WD-repeat proteins. Nature 1994;371:297-300.

YajC
11051763 Protein traffic in bacteria: multiple routes from the ribosome to and across the membrane. Prog Nucleic Acid Res Mol Biol 2001;66:107-157.

eIF2A
12133843 Characterization of mammalian eIF2A and identification of the yeast homolog. J Biol Chem. 2002;277:37079-37087.

Domain	Description	Evalue	Bits	GA	Start	End
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.1	2	22.90	118	170
IKI3	IKI3 family	0.018	2	19.30	137	158
eIF2A	Eukaryotic translation initiation factor eIF2A	0.0091	5	20.50	153	203
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	2.8E-09	26	22.90	168	226
IKI3	IKI3 family	0.0015	5	19.30	169	202
WD40	WD domain, G-beta repeat	0.021	5	21.00	174	201
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.079	1	29.50	193	212
WD40	WD domain, G-beta repeat	0.00019	11	21.00	207	238
YajC	Preprotein translocase subunit	8.1E-05	11	20.70	215	245
WD40	WD domain, G-beta repeat	1.4E-09	27	21.00	250	285
eIF2A	Eukaryotic translation initiation factor eIF2A	2.1E-06	17	20.50	254	369
IKI3	IKI3 family	0.075	-1	19.30	255	285
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	7.4E-06	15	22.90	255	287
WD40	WD domain, G-beta repeat	2.8E-07	20	21.00	297	337
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	1.8E-06	17	22.90	298	360
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	0.032	2	29.50	317	317
WD40	WD domain, G-beta repeat	0.18	2	21.00	343	379
eIF2A	Eukaryotic translation initiation factor eIF2A	0.017	4	20.50	350	398
Ge1_WD40	WD40 region of Ge1, enhancer of mRNA-decapping protein	8.1E-05	10	29.50	387	426
WD40	WD domain, G-beta repeat	4.7E-07	19	21.00	387	422
ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	0.12	2	22.90	390	423