c2pfam

AT5G28740.1 :

Domain Description Evalue Bits GA Start End
TPR_14 Tetratricopeptide repeat 0.037 4 23.50 48 67
Suf Suppressor of forked protein (Suf) 0.00017 11 20.40 89 165
TPR_14 Tetratricopeptide repeat 1 0 23.50 102 133
Mad3_BUB1_I Mad3/BUB1 homology region 1 0.0027 7 20.70 185 276
Suf Suppressor of forked protein (Suf) 0.023 4 20.40 240 297
TPR_14 Tetratricopeptide repeat 0.062 4 23.50 251 274
TPR_2 Tetratricopeptide repeat 0.018 5 22.40 252 274
TPR_8 Tetratricopeptide repeat 0.004 7 25.70 252 274
TPR_12 Tetratricopeptide repeat 0.047 3 30.10 253 274
HAT HAT (Half-A-TPR) repeat 0.24 1 21.00 266 273
HAT HAT (Half-A-TPR) repeat 0.81 -1 21.00 292 298
Mad3_BUB1_I Mad3/BUB1 homology region 1 0.18 1 20.70 424 449
Suf Suppressor of forked protein (Suf) 0.0035 6 20.40 437 488
TPR_12 Tetratricopeptide repeat 0.014 5 30.10 443 489
Mad3_BUB1_I Mad3/BUB1 homology region 1 0.018 4 20.70 454 486
TPR_2 Tetratricopeptide repeat 0.0021 8 22.40 461 488
TPR_14 Tetratricopeptide repeat 0.04 4 23.50 464 490
Mad3_BUB1_I Mad3/BUB1 homology region 1 0.00015 11 20.70 512 576
TPR_14 Tetratricopeptide repeat 0.18 2 23.50 516 544
TPR_8 Tetratricopeptide repeat 0.78 0 25.70 521 544
TPR_12 Tetratricopeptide repeat 0.08 3 30.10 523 579
TPR_8 Tetratricopeptide repeat 0.025 4 25.70 551 578
TPR_2 Tetratricopeptide repeat 0.0046 7 22.40 553 579
TPR_14 Tetratricopeptide repeat 0.0026 8 23.50 555 588
Suf Suppressor of forked protein (Suf) 1.3E-06 18 20.40 567 661
HAT HAT (Half-A-TPR) repeat 0.54 0 21.00 568 590
Mad3_BUB1_I Mad3/BUB1 homology region 1 0.00014 11 20.70 587 650
TPR_8 Tetratricopeptide repeat 0.0067 6 25.70 603 621
TPR_2 Tetratricopeptide repeat 0.0065 6 22.40 603 621
TPR_12 Tetratricopeptide repeat 0.026 4 30.10 604 651
TPR_14 Tetratricopeptide repeat 0.0041 7 23.50 604 633
HAT HAT (Half-A-TPR) repeat 0.049 3 21.00 605 635
TPR_8 Tetratricopeptide repeat 0.22 1 25.70 626 652
TPR_14 Tetratricopeptide repeat 0.00054 10 23.50 626 656
TPR_2 Tetratricopeptide repeat 0.47 0 22.40 641 655
HAT HAT (Half-A-TPR) repeat 0.17 1 21.00 678 687
TPR_5 Tetratrico peptide repeat 7.1E-05 12 21.40 681 721
TPR_8 Tetratricopeptide repeat 0.64 0 25.70 700 721
TPR_12 Tetratricopeptide repeat 0.46 0 30.10 704 721
TPR_14 Tetratricopeptide repeat 0.31 2 23.50 704 720
TPR_2 Tetratricopeptide repeat 0.77 0 22.40 708 721
Suf Suppressor of forked protein (Suf) 0.0078 5 20.40 710 748
HAT HAT (Half-A-TPR) repeat 0.0082 5 21.00 712 721

917

TPR_14
Suf
TPR_14
Mad3_BUB1_I
Suf
TPR_14
TPR_2
TPR_8
TPR_12
HAT
HAT
Mad3_BUB1_I
Suf
TPR_12
Mad3_BUB1_I
TPR_2
TPR_14
Mad3_BUB1_I
TPR_14
TPR_8
TPR_12
TPR_8
TPR_2
TPR_14
Suf
HAT
Mad3_BUB1_I
TPR_8
TPR_2
TPR_12
TPR_14
HAT
TPR_8
TPR_14
TPR_2
HAT
TPR_5
TPR_8
TPR_12
TPR_14
TPR_2
Suf
HAT

References:

HAT
9478129 The HAT helix, a repetitive motif implicated in RNA processing. Trends Biochem Sci 1998;23:15-16.

TPR_5

Suf
9826695 Autoregulation at the level of mRNA 3' end formation of the suppressor of forked gene of Drosophila melanogaster is conserved in Drosophila virilis. Proc Natl Acad Sci U S A 1998;95:14302-14307.

TPR_2
7667876 Tetratrico peptide repeat interactions: to TPR or not to TPR? Trends Biochem Sci 1995;20:257-259.
9482716 The structure of the tetratricopeptide repeats of protein phosphatase 5: implications for TPR-mediated protein-protein interactions. EMBO J 1998;17:1192-1199.

TPR_14

TPR_12

Mad3_BUB1_I
10704439 MAD3 encodes a novel component of the spindle checkpoint which interacts with Bub3p, Cdc20p, and Mad2p. J Cell Biol 2000;148:871-882.

TPR_8

Domain	Description	Evalue	Bits	GA	Start	End
TPR_14	Tetratricopeptide repeat	0.037	4	23.50	48	67
Suf	Suppressor of forked protein (Suf)	0.00017	11	20.40	89	165
TPR_14	Tetratricopeptide repeat	1	0	23.50	102	133
Mad3_BUB1_I	Mad3/BUB1 homology region 1	0.0027	7	20.70	185	276
Suf	Suppressor of forked protein (Suf)	0.023	4	20.40	240	297
TPR_14	Tetratricopeptide repeat	0.062	4	23.50	251	274
TPR_2	Tetratricopeptide repeat	0.018	5	22.40	252	274
TPR_8	Tetratricopeptide repeat	0.004	7	25.70	252	274
TPR_12	Tetratricopeptide repeat	0.047	3	30.10	253	274
HAT	HAT (Half-A-TPR) repeat	0.24	1	21.00	266	273
HAT	HAT (Half-A-TPR) repeat	0.81	-1	21.00	292	298
Mad3_BUB1_I	Mad3/BUB1 homology region 1	0.18	1	20.70	424	449
Suf	Suppressor of forked protein (Suf)	0.0035	6	20.40	437	488
TPR_12	Tetratricopeptide repeat	0.014	5	30.10	443	489
Mad3_BUB1_I	Mad3/BUB1 homology region 1	0.018	4	20.70	454	486
TPR_2	Tetratricopeptide repeat	0.0021	8	22.40	461	488
TPR_14	Tetratricopeptide repeat	0.04	4	23.50	464	490
Mad3_BUB1_I	Mad3/BUB1 homology region 1	0.00015	11	20.70	512	576
TPR_14	Tetratricopeptide repeat	0.18	2	23.50	516	544
TPR_8	Tetratricopeptide repeat	0.78	0	25.70	521	544
TPR_12	Tetratricopeptide repeat	0.08	3	30.10	523	579
TPR_8	Tetratricopeptide repeat	0.025	4	25.70	551	578
TPR_2	Tetratricopeptide repeat	0.0046	7	22.40	553	579
TPR_14	Tetratricopeptide repeat	0.0026	8	23.50	555	588
Suf	Suppressor of forked protein (Suf)	1.3E-06	18	20.40	567	661
HAT	HAT (Half-A-TPR) repeat	0.54	0	21.00	568	590
Mad3_BUB1_I	Mad3/BUB1 homology region 1	0.00014	11	20.70	587	650
TPR_8	Tetratricopeptide repeat	0.0067	6	25.70	603	621
TPR_2	Tetratricopeptide repeat	0.0065	6	22.40	603	621
TPR_12	Tetratricopeptide repeat	0.026	4	30.10	604	651
TPR_14	Tetratricopeptide repeat	0.0041	7	23.50	604	633
HAT	HAT (Half-A-TPR) repeat	0.049	3	21.00	605	635
TPR_8	Tetratricopeptide repeat	0.22	1	25.70	626	652
TPR_14	Tetratricopeptide repeat	0.00054	10	23.50	626	656
TPR_2	Tetratricopeptide repeat	0.47	0	22.40	641	655
HAT	HAT (Half-A-TPR) repeat	0.17	1	21.00	678	687
TPR_5	Tetratrico peptide repeat	7.1E-05	12	21.40	681	721
TPR_8	Tetratricopeptide repeat	0.64	0	25.70	700	721
TPR_12	Tetratricopeptide repeat	0.46	0	30.10	704	721
TPR_14	Tetratricopeptide repeat	0.31	2	23.50	704	720
TPR_2	Tetratricopeptide repeat	0.77	0	22.40	708	721
Suf	Suppressor of forked protein (Suf)	0.0078	5	20.40	710	748
HAT	HAT (Half-A-TPR) repeat	0.0082	5	21.00	712	721