AT5G37020.1 :
Domain
Description
Evalue
Bits
GA
Start
End
SIS_2
SIS domain
4.6E-05
12
27.00
36
100
EcoRII-N
Restriction endonuclease EcoRII, N-terminal
0.002
6
25.00
124
157
B3
B3 DNA binding domain
2.5E-23
71
30.10
126
226
B3
B3 DNA binding domain
0.19
0
30.10
233
266
Auxin_resp
Auxin response factor
1.6E-35
110
21.10
252
335
AUX_IAA
AUX/IAA family
0.28
-1
20.80
479
519
AUX_IAA
AUX/IAA family
1.3E-11
33
20.80
698
790
B3
B3 DNA binding domain
0.66
-2
30.10
739
777
EcoRII-N
Restriction endonuclease EcoRII, N-terminal
0.0043
5
25.00
777
799
811
SIS_2
EcoRII-N
B3
B3
Auxin_resp
AUX_IAA
AUX_IAA
B3
EcoRII-N
References:
B3
9862967
RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants.
Nucleic Acids Res 1999;27:470-478.
9188533
ARF1, a transcription factor that binds to auxin response elements.
Science 1997;276:1865-1868.
9165754
The conserved B3 domain of VIVIPAROUS1 has a cooperative DNA binding activity.
Plant Cell 1997;9:799-807.
AUX_IAA
9482737
The Arabidopsis gene MONOPTEROS encodes a transcription factor mediating embryo axis formation and vascular development.
EMBO J 1998;17:1405-1411.
Auxin_resp
11922106
Auxin response factor family in rice.
Genes Genet Syst 2001;76:373-380.
EcoRII-N
14659759
Crystal structure of type IIE restriction endonuclease EcoRII reveals an autoinhibition mechanism by a novel effector-binding fold.
J Mol Biol. 2004;335:307-319.
SIS_2