c2pfam

AT5G37030.1 :

Domain Description Evalue Bits GA Start End
AAA_12 AAA domain 0.1 1 27.00 24 95
AAA_11 AAA domain 5.6E-11 32 27.00 203 316
ResIII Type III restriction enzyme, res subunit 2.5E-05 14 20.90 203 360
Helicase_RecD Helicase 0.00011 11 22.70 235 359
AAA_19 AAA domain 7E-09 25 25.10 235 387
AAA_30 AAA domain 0.00013 11 27.00 326 388
Viral_helicase1 Viral (Superfamily 1) RNA helicase 3.2E-08 23 20.90 335 406
AAA_11 AAA domain 1.9E-12 37 27.00 342 391
AAA_12 AAA domain 0 196 27.00 400 597
Viral_helicase1 Viral (Superfamily 1) RNA helicase 0.00017 11 20.90 497 592
UvrD_C_2 UvrD-like helicase C-terminal domain 0.00016 11 27.40 546 594

638

AAA_12
AAA_11
ResIII
Helicase_RecD
AAA_19
AAA_30
Viral_helicase1
AAA_11
AAA_12
Viral_helicase1
UvrD_C_2

References:

UvrD_C_2

Helicase_RecD

Viral_helicase1
8269709 Evolution and taxonomy of positive-strand RNA viruses: implications of comparative analysis of amino acid sequences. Crit Rev Biochem Mol Biol 1993;28:375-430.
10217401 RNA helicase activity of Semliki Forest virus replicase protein NSP2. FEBS Lett 1999;448:19-22.
8057461 ATPase and GTPase activities associated with Semliki Forest virus nonstructural protein nsP2. J Virol 1994;68:5804-5810.
10982322 Helicase and capping enzyme active site mutations in brome mosaic virus protein 1a cause defects in template recruitment, negative-strand RNA synthesis, and viral RNA capping. J Virol 2000;74:8803-8811.

ResIII

AAA_12

AAA_11

AAA_19

AAA_30

Domain	Description	Evalue	Bits	GA	Start	End
AAA_12	AAA domain	0.1	1	27.00	24	95
AAA_11	AAA domain	5.6E-11	32	27.00	203	316
ResIII	Type III restriction enzyme, res subunit	2.5E-05	14	20.90	203	360
Helicase_RecD	Helicase	0.00011	11	22.70	235	359
AAA_19	AAA domain	7E-09	25	25.10	235	387
AAA_30	AAA domain	0.00013	11	27.00	326	388
Viral_helicase1	Viral (Superfamily 1) RNA helicase	3.2E-08	23	20.90	335	406
AAA_11	AAA domain	1.9E-12	37	27.00	342	391
AAA_12	AAA domain	0	196	27.00	400	597
Viral_helicase1	Viral (Superfamily 1) RNA helicase	0.00017	11	20.90	497	592
UvrD_C_2	UvrD-like helicase C-terminal domain	0.00016	11	27.40	546	594