AT5G39620.1 :

DomainDescriptionEvalueBitsGAStartEnd
ArfADP-ribosylation factor family3E-175320.303167
AAA_22AAA domain5.5E-072127.00346
G-alphaG-protein alpha subunit6.7E-061620.103142
SeptinSeptin0.000511020.00453
MCMMCM2/3/5 family0.000151125.20427
AAA_24AAA domain3.9E-061727.00540
SRPRBSignal recognition particle receptor beta subunit1.7E-051520.50669
ABC_tranABC transporter0.00041123.10723
TniBBacterial TniB protein0.000121220.10739
PduV-EutPEthanolamine utilisation - propanediol utilisation1.5E-051520.50741
Gtr1_RagAGtr1/RagA G protein conserved region2.1E-092820.107130
RasRas family017620.807174
RocRas of Complex, Roc, domain of DAPkinase4.8E-3310527.007125
MMR_HSR1GTPase of unknown function1.6E-072224.507106
RsgA_GTPaseRsgA GTPase1.9E-051530.00829
AAA_16AAA ATPase domain1.5E-051632.60829
NACHTNACHT domain0.000211220.40824
AAA_5AAA domain (dynein-related subfamily)0.000151220.80827
AAA_18AAA domain7.1E-051429.40852
AAA_14AAA domain0.000521127.00847
GTP_EFTUElongation factor Tu GTP binding domain8.1E-082320.2051163
SeptinSeptin0.068320.0091135
NACHTNACHT domain0.18220.40113149
AAA_14AAA domain0.26227.00136192
PduV-EutPEthanolamine utilisation - propanediol utilisation0.87020.50137166

 204

Arf
AAA_22
G-alpha
Septin
MCM
AAA_24
SRPRB
ABC_tran
TniB
PduV-EutP
Gtr1_RagA
Ras
Roc
MMR_HSR1
RsgA_GTPase
AAA_16
NACHT
AAA_5
AAA_18
AAA_14
GTP_EFTU
Septin
NACHT
AAA_14
PduV-EutP


References:

SRPRB
7844142 The beta subunit of the signal recognition particle receptor is a transmembrane GTPase that anchors the alpha subunit, a peripheral membrane GTPase, to the endoplasmic reticulum membrane. J Cell Biol. 1995;128:273-282.

AAA_16

GTP_EFTU
9311785 Visualization of elongation factor Tu on the Escherichia coli ribosome. Nature 1997;389:403-406.

AAA_14

ABC_tran
1864505 Homology between proteins controlling Streptomyces fradiae tylosin resistance and ATP-binding transport. Gene 1991;102:27-32.
1977073 Structure and function of haemolysin B,P-glycoprotein and other members of a novel family of membrane translocators. Mol Microbiol 1990;4:873-880.
2229036 Binding protein-dependent transport systems. J Bioenerg Biomembr 1990;22:571-592.
9872322 Crystal structure of the ATP-binding subunit of an ABC transporter. Nature 1998;396:703-707.

G-alpha
8073283 Structures of active conformations of Gi alpha 1 and the mechanism of GTP hydrolysis. Science 1994;265:1405-1412.
8851656 How G proteins work: a continuing story. Trends Biochem Sci 1996;21:41-44.

Septin
12665577 Molecular dissection of a yeast septin: distinct domains are required for septin interaction, localization, and function. Mol Cell Biol 2003;23:2762-2777.
14611653 The septins. Genome Biol 2003;4:236.

RsgA_GTPase

PduV-EutP
15516577 Evidence that a B12-adenosyl transferase is encoded within the ethanolamine operon of Salmonella enterica. J Bacteriol. 2004;186:7635-7644.
10464203 The 17-gene ethanolamine (eut) operon of Salmonella typhimurium encodes five homologues of carboxysome shell proteins. J Bacteriol 1999;181:5317-5329.
10498708 The propanediol utilization (pdu) operon of Salmonella enterica serovar Typhimurium LT2 includes genes necessary for formation of polyhedral organelles involved in coenzyme B(12)-dependent 1, 2-propanediol degradation. J Bacteriol. 1999;181:5967-5975.

MCM
8332451 A common set of conserved motifs in a vast variety of putative nucleic acid-dependent ATPases including MCM proteins involved in the initiation of eukaryotic DNA replication. Nucleic Acids Res 1993;21:2541-2547.

MMR_HSR1
8180467 Structure and evolution of a member of a new subfamily of GTP-binding proteins mapping to the human MHC class I region. Mamm Genome 1994;5:100-105.

Arf
7990966 Structure of the human ADP-ribosylation factor 1 complexed with GDP. Nature 1994;372:704-708.
7759471 Structure and function of ARF proteins: Activators of cholera toxin and critical components of intracellular vesicular transport processes. J. Biol. Chem. 1995;270:12327-12330.
7770914 Arf proteins: the membrane traffic police? Trends Biochem Sci 1995;20:147-150.
1899243 Human ADP-ribosylation factors. A functionally conserved family of GTP-binding proteins. J Biol Chem 1991;266:2606-2614.

NACHT
10782090 The NACHT family - a new group of predicted NTPases implicated in apoptosis and MHC transcription activation. Trends Biochem Sci 2000;25:223-224.

TniB
8195081 Transposon Tn5090 of plasmid R751, which carries an integron, is related to Tn7, Mu, and the retroelements. J Bacteriol 1994;176:3257-3268.
8594337 Four genes, two ends, and a res region are involved in transposition of Tn5053: a paradigm for a novel family of transposons carrying either a mer operon or an integron. Mol Microbiol 1995;17:1189-1200.

Ras
11387043 The Rab GTPase family. Genome Biol 2001;2:REVIEWS3007.

AAA_5
7646486 A 200-amino acid ATPase module in search of a basic function. Bioessays 1995;17:639-650.
9927482 AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Genome Res 1999;9:27-43.

AAA_18

AAA_24

AAA_22

Roc

Gtr1_RagA
1620108 Putative GTP-binding protein, Gtr1, associated with the function of the Pho84 inorganic phosphate transporter in Saccharomyces cerevisiae. Mol Cell Biol 1992;12:2958-2966.
7499430 Cloning of a novel family of mammalian GTP-binding proteins (RagA, RagBs, RagB1) with remote similarity to the Ras-related GTPases. J Biol Chem 1995;270:28982-28988.
10388807 Saccharomyces cerevisiae putative G protein, Gtr1p, which forms complexes with itself and a novel protein designated as Gtr2p, negatively regulates the Ran/Gsp1p G protein cycle through Gtr2p. Genetics 1999;152:853-867.
11073942 Novel G proteins, Rag C and Rag D, interact with GTP-binding proteins, Rag A and Rag B. J Biol Chem 2001;276:7246-7257.