c2pfam

AT5G40490.1 :

Domain Description Evalue Bits GA Start End
RRM_7 RNA recognition motif 3.4E-06 16 27.00 43 102
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2.4E-18 54 20.70 44 105
Nup35_RRM Nup53/35/40-type RNA recognition motif 4.9E-06 15 20.90 52 111
Nup35_RRM_2 Nup53/35/40-type RNA recognition motif 0.0032 6 27.00 54 91
Nup35_RRM Nup53/35/40-type RNA recognition motif 0.1 1 20.90 130 166
RRM_7 RNA recognition motif 5E-10 28 27.00 130 193
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 2.4E-20 61 20.70 132 201
SF3a60_bindingd Splicing factor SF3a60 binding domain 1.8E-05 13 19.10 143 159
Nup35_RRM_2 Nup53/35/40-type RNA recognition motif 0.00019 10 27.00 147 182

423

RRM_7
RRM_1
Nup35_RRM
Nup35_RRM_2
Nup35_RRM
RRM_7
RRM_1
SF3a60_bindingd
Nup35_RRM_2

References:

RRM_7

Nup35_RRM_2

Nup35_RRM

RRM_1
8290338 Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. Nucleic Acid Res 1993;21:5803-5816.

SF3a60_bindingd
17098193 Solution structures of the SURP domains and the subunit-assembly mechanism within the splicing factor SF3a complex in 17S U2 snRNP. Structure. 2006;14:1677-1689.

Domain	Description	Evalue	Bits	GA	Start	End
RRM_7	RNA recognition motif	3.4E-06	16	27.00	43	102
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	2.4E-18	54	20.70	44	105
Nup35_RRM	Nup53/35/40-type RNA recognition motif	4.9E-06	15	20.90	52	111
Nup35_RRM_2	Nup53/35/40-type RNA recognition motif	0.0032	6	27.00	54	91
Nup35_RRM	Nup53/35/40-type RNA recognition motif	0.1	1	20.90	130	166
RRM_7	RNA recognition motif	5E-10	28	27.00	130	193
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	2.4E-20	61	20.70	132	201
SF3a60_bindingd	Splicing factor SF3a60 binding domain	1.8E-05	13	19.10	143	159
Nup35_RRM_2	Nup53/35/40-type RNA recognition motif	0.00019	10	27.00	147	182