c2pfam

AT5G41350.1 :

Domain Description Evalue Bits GA Start End
Endonuclease_7 Recombination endonuclease VII 8.5E-05 13 21.00 156 204
zf-P11 P-11 zinc finger 0.68 0 24.90 158 165
FANCL_C FANCL C-terminal domain 0.00019 12 20.70 158 196
zf-rbx1 RING-H2 zinc finger domain 7E-14 42 31.00 158 202
zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 4.6E-07 20 27.00 158 204
zf-Nse Zinc-finger of the MIZ type in Nse subunit 2.7E-06 18 20.70 159 202
Prok-RING_4 Prokaryotic RING finger family 4 0.023 5 27.00 159 171
zf-RING_2 Ring finger domain 2.6E-15 47 27.30 160 202
zf-RING_11 RING-like zinc finger 8.6E-11 32 27.00 160 188
zf-ANAPC11 Anaphase-promoting complex subunit 11 RING-H2 finger 7.4E-09 26 21.40 160 207
zf-RING_5 zinc-RING finger domain 5.7E-09 26 27.90 161 203
zf-C3HC4_4 zinc finger of C3HC4-type, RING 8.8E-06 16 30.00 161 201
zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 5.5E-13 39 27.00 161 201
zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 1.5E-11 34 21.00 161 201
zf-RING_UBOX RING-type zinc-finger 1.7E-11 34 25.20 161 199
Prok-RING_4 Prokaryotic RING finger family 4 0.0014 9 27.00 161 205
RINGv RING-variant domain 8.2E-05 13 21.60 161 201
zf-P11 P-11 zinc finger 0.00025 11 24.90 172 203
Eaf7 Chromatin modification-related protein EAF7 0.00031 11 20.80 180 203
zf-RING_UBOX RING-type zinc-finger 0.18 2 25.20 198 205

212

Endonuclease_7
zf-P11
FANCL_C
zf-rbx1
zf-C3HC4_3
zf-Nse
Prok-RING_4
zf-RING_2
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
Prok-RING_4
RINGv
zf-P11
Eaf7
zf-RING_UBOX

References:

FANCL_C
16474167 The WD40 repeats of FANCL are required for Fanconi anemia core complex assembly. J Biol Chem. 2006;281:10896-10905.

zf-C3HC4
8804826 The RING finger domain: a recent example of a sequence-structure family. Curr Opin Struct Biol 1996;6:395-401.
10500182 RING fingers mediate ubiquitin-conjugating enzyme (E2)-dependent ubiquitination. Proc Natl Acad Sci U S A 1999;96:11364-11369.

zf-RING_UBOX

RINGv

zf-ANAPC11

Eaf7

zf-C3HC4_2

zf-RING_5

Endonuclease_7
10075917 X-ray structure of T4 endonuclease VII: a DNA junction resolvase with a novel fold and unusual domain-swapped dimer architecture. EMBO J 1999;18:1447-1458.

zf-rbx1

zf-P11

zf-RING_11

zf-C3HC4_4

zf-C3HC4_3

Prok-RING_4

zf-RING_2

zf-Nse
12966087 Novel essential DNA repair proteins Nse1 and Nse2 are subunits of the fission yeast Smc5-Smc6 complex. J Biol Chem 2003;278:45460-45467.

Domain	Description	Evalue	Bits	GA	Start	End
Endonuclease_7	Recombination endonuclease VII	8.5E-05	13	21.00	156	204
zf-P11	P-11 zinc finger	0.68	0	24.90	158	165
FANCL_C	FANCL C-terminal domain	0.00019	12	20.70	158	196
zf-rbx1	RING-H2 zinc finger domain	7E-14	42	31.00	158	202
zf-C3HC4_3	Zinc finger, C3HC4 type (RING finger)	4.6E-07	20	27.00	158	204
zf-Nse	Zinc-finger of the MIZ type in Nse subunit	2.7E-06	18	20.70	159	202
Prok-RING_4	Prokaryotic RING finger family 4	0.023	5	27.00	159	171
zf-RING_2	Ring finger domain	2.6E-15	47	27.30	160	202
zf-RING_11	RING-like zinc finger	8.6E-11	32	27.00	160	188
zf-ANAPC11	Anaphase-promoting complex subunit 11 RING-H2 finger	7.4E-09	26	21.40	160	207
zf-RING_5	zinc-RING finger domain	5.7E-09	26	27.90	161	203
zf-C3HC4_4	zinc finger of C3HC4-type, RING	8.8E-06	16	30.00	161	201
zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	5.5E-13	39	27.00	161	201
zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	1.5E-11	34	21.00	161	201
zf-RING_UBOX	RING-type zinc-finger	1.7E-11	34	25.20	161	199
Prok-RING_4	Prokaryotic RING finger family 4	0.0014	9	27.00	161	205
RINGv	RING-variant domain	8.2E-05	13	21.60	161	201
zf-P11	P-11 zinc finger	0.00025	11	24.90	172	203
Eaf7	Chromatin modification-related protein EAF7	0.00031	11	20.80	180	203
zf-RING_UBOX	RING-type zinc-finger	0.18	2	25.20	198	205