c2pfam

AT5G41690.1 :

Domain Description Evalue Bits GA Start End
BRAP2 BRCA1-associated protein 2 0.011 5 20.30 63 130
RRM_Rrp7 Rrp7 RRM-like N-terminal domain 5.6E-05 12 24.00 66 99
PHM7_cyt Cytosolic domain of 10TM putative phosphate transporter 0.49 0 27.00 68 104
RRM_occluded Occluded RNA-recognition motif 0.02 4 30.00 68 138
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6E-19 57 20.70 70 138
RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.0017 7 27.00 70 165
Nup35_RRM_2 Nup53/35/40-type RNA recognition motif 0.00071 9 27.00 84 125
PHM7_cyt Cytosolic domain of 10TM putative phosphate transporter 0.089 2 27.00 106 126
SET_assoc Histone lysine methyltransferase SET associated 0.34 0 21.00 112 131
RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5E-08 22 27.00 182 263
RRM_Rrp7 Rrp7 RRM-like N-terminal domain 0.2 1 24.00 183 214
BRAP2 BRCA1-associated protein 2 0.022 4 20.30 184 248
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3.5E-19 58 20.70 187 255
RRM_occluded Occluded RNA-recognition motif 0.042 3 30.00 187 225
Nup35_RRM_2 Nup53/35/40-type RNA recognition motif 0.00025 10 27.00 196 242
PHM7_cyt Cytosolic domain of 10TM putative phosphate transporter 0.097 2 27.00 220 243
SET_assoc Histone lysine methyltransferase SET associated 0.087 2 21.00 229 255
BRAP2 BRCA1-associated protein 2 0.0038 7 20.30 306 372
RRM_Rrp7 Rrp7 RRM-like N-terminal domain 0.37 0 24.00 307 337
RRM_occluded Occluded RNA-recognition motif 0.00079 9 30.00 308 372
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5E-14 41 20.70 310 378
RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.00064 9 27.00 310 384
Nup35_RRM_2 Nup53/35/40-type RNA recognition motif 0.00035 10 27.00 321 365
PHM7_cyt Cytosolic domain of 10TM putative phosphate transporter 0.076 2 27.00 343 366
SET_assoc Histone lysine methyltransferase SET associated 0.067 2 21.00 352 380
BRAP2 BRCA1-associated protein 2 0.00047 10 20.30 432 504
RRM_Rrp7 Rrp7 RRM-like N-terminal domain 0.0028 7 24.00 435 466
RRM_occluded Occluded RNA-recognition motif 2.6E-05 13 30.00 436 506
RRM_5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.00056 9 27.00 438 504
RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1.3E-17 53 20.70 438 506
Nup35_RRM_2 Nup53/35/40-type RNA recognition motif 0.027 4 27.00 449 493
PHM7_cyt Cytosolic domain of 10TM putative phosphate transporter 0.011 5 27.00 472 495
SET_assoc Histone lysine methyltransferase SET associated 0.024 4 21.00 480 501
PHM7_cyt Cytosolic domain of 10TM putative phosphate transporter 0.1 2 27.00 522 549

567

BRAP2
RRM_Rrp7
PHM7_cyt
RRM_occluded
RRM_1
RRM_5
Nup35_RRM_2
PHM7_cyt
SET_assoc
RRM_5
RRM_Rrp7
BRAP2
RRM_1
RRM_occluded
Nup35_RRM_2
PHM7_cyt
SET_assoc
BRAP2
RRM_Rrp7
RRM_occluded
RRM_1
RRM_5
Nup35_RRM_2
PHM7_cyt
SET_assoc
BRAP2
RRM_Rrp7
RRM_occluded
RRM_5
RRM_1
Nup35_RRM_2
PHM7_cyt
SET_assoc
PHM7_cyt

References:

SET_assoc
12389037 Structure of the SET domain histone lysine methyltransferase Clr4. Nat Struct Biol 2002;0:0-0.
12575990 Structure of SET domain proteins: a new twist on histone methylation. Trends Biochem Sci 2003;28:59-62.

RRM_5

PHM7_cyt

Nup35_RRM_2

RRM_1
8290338 Analysis of the RNA-recognition motif and RS and RGG domains: conservation in metazoan pre-mRNA splicing factors. Nucleic Acid Res 1993;21:5803-5816.

RRM_Rrp7

RRM_occluded

BRAP2
9497340 Identification of a novel cytoplasmic protein that specifically binds to nuclear localization signal motifs. J Biol Chem 1998;273:6183-6189.

Domain	Description	Evalue	Bits	GA	Start	End
BRAP2	BRCA1-associated protein 2	0.011	5	20.30	63	130
RRM_Rrp7	Rrp7 RRM-like N-terminal domain	5.6E-05	12	24.00	66	99
PHM7_cyt	Cytosolic domain of 10TM putative phosphate transporter	0.49	0	27.00	68	104
RRM_occluded	Occluded RNA-recognition motif	0.02	4	30.00	68	138
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	6E-19	57	20.70	70	138
RRM_5	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.0017	7	27.00	70	165
Nup35_RRM_2	Nup53/35/40-type RNA recognition motif	0.00071	9	27.00	84	125
PHM7_cyt	Cytosolic domain of 10TM putative phosphate transporter	0.089	2	27.00	106	126
SET_assoc	Histone lysine methyltransferase SET associated	0.34	0	21.00	112	131
RRM_5	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	5E-08	22	27.00	182	263
RRM_Rrp7	Rrp7 RRM-like N-terminal domain	0.2	1	24.00	183	214
BRAP2	BRCA1-associated protein 2	0.022	4	20.30	184	248
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	3.5E-19	58	20.70	187	255
RRM_occluded	Occluded RNA-recognition motif	0.042	3	30.00	187	225
Nup35_RRM_2	Nup53/35/40-type RNA recognition motif	0.00025	10	27.00	196	242
PHM7_cyt	Cytosolic domain of 10TM putative phosphate transporter	0.097	2	27.00	220	243
SET_assoc	Histone lysine methyltransferase SET associated	0.087	2	21.00	229	255
BRAP2	BRCA1-associated protein 2	0.0038	7	20.30	306	372
RRM_Rrp7	Rrp7 RRM-like N-terminal domain	0.37	0	24.00	307	337
RRM_occluded	Occluded RNA-recognition motif	0.00079	9	30.00	308	372
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	5E-14	41	20.70	310	378
RRM_5	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.00064	9	27.00	310	384
Nup35_RRM_2	Nup53/35/40-type RNA recognition motif	0.00035	10	27.00	321	365
PHM7_cyt	Cytosolic domain of 10TM putative phosphate transporter	0.076	2	27.00	343	366
SET_assoc	Histone lysine methyltransferase SET associated	0.067	2	21.00	352	380
BRAP2	BRCA1-associated protein 2	0.00047	10	20.30	432	504
RRM_Rrp7	Rrp7 RRM-like N-terminal domain	0.0028	7	24.00	435	466
RRM_occluded	Occluded RNA-recognition motif	2.6E-05	13	30.00	436	506
RRM_5	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.00056	9	27.00	438	504
RRM_1	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	1.3E-17	53	20.70	438	506
Nup35_RRM_2	Nup53/35/40-type RNA recognition motif	0.027	4	27.00	449	493
PHM7_cyt	Cytosolic domain of 10TM putative phosphate transporter	0.011	5	27.00	472	495
SET_assoc	Histone lysine methyltransferase SET associated	0.024	4	21.00	480	501
PHM7_cyt	Cytosolic domain of 10TM putative phosphate transporter	0.1	2	27.00	522	549