c2pfam

AT5G42380.1 :

Domain Description Evalue Bits GA Start End
Msap1 Mitotic spindle associated protein SHE1 0.00011 11 27.00 7 44
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 1.4E-06 18 21.40 17 107
EF-hand_7 EF-hand domain pair 2.7E-07 20 30.00 21 71
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.00059 9 21.30 39 74
EF-hand_8 EF-hand domain pair 7.7E-06 15 28.00 45 69
EF-hand_7 EF-hand domain pair 7.5E-16 48 30.00 49 111
EF-hand_6 EF-hand domain 1.1E-08 24 25.00 49 78
EF-hand_1 EF hand 1.2E-08 24 25.40 49 75
EF-hand_5 EF hand 1.2E-09 27 25.90 50 73
Dockerin_1 Dockerin type I repeat 0.0067 6 20.50 55 67
Dockerin_1 Dockerin type I repeat 0.00042 10 20.50 57 106
EF-hand_8 EF-hand domain pair 1.5E-13 40 28.00 61 111
EF-hand_4 Cytoskeletal-regulatory complex EF hand 9.4E-07 18 21.30 80 110
EF-hand_1 EF hand 7.4E-10 27 25.40 85 111
EF-hand_6 EF-hand domain 4E-07 19 25.00 87 111
EF-hand_5 EF hand 1E-07 21 25.90 94 110
EF-hand_7 EF-hand domain pair 3.6E-10 30 30.00 122 185
EF-hand_6 EF-hand domain 0.022 4 25.00 123 152
EF-hand_8 EF-hand domain pair 3.3E-14 42 28.00 138 184
SPARC_Ca_bdg Secreted protein acidic and rich in cysteine Ca binding region 0.06 3 21.40 157 180
EF-hand_1 EF hand 8.2E-09 24 25.40 160 185
EF-hand_6 EF-hand domain 6.3E-06 15 25.00 166 185
EF-hand_5 EF hand 1.9E-05 14 25.90 167 183
EF-hand_4 Cytoskeletal-regulatory complex EF hand 0.00097 9 21.30 168 185

185

Msap1
SPARC_Ca_bdg
EF-hand_7
EF-hand_4
EF-hand_8
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
Dockerin_1
Dockerin_1
EF-hand_8
EF-hand_4
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
EF-hand_6
EF-hand_8
SPARC_Ca_bdg
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_4

References:

EF-hand_8

EF-hand_7

EF-hand_6

EF-hand_5

EF-hand_4

Dockerin_1
10390637 The cellulosome concept as an efficient microbial strategy for the degradation of insoluble polysaccharides [In Process Citation] Trends Microbiol 1999;7:275-281.
10898940 Secondary structure and calcium-induced folding of the Clostridium thermocellum dockerin domain determined by NMR spectroscopy. Arch Biochem Biophys 2000;379:237-244.

Msap1

SPARC_Ca_bdg
16121393 The C-terminal Ca2+-binding domain of SPARC confers anti-spreading activity to human urothelial cells. J Cell Physiol. 2006;206:211-220.

EF-hand_1

Domain	Description	Evalue	Bits	GA	Start	End
Msap1	Mitotic spindle associated protein SHE1	0.00011	11	27.00	7	44
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	1.4E-06	18	21.40	17	107
EF-hand_7	EF-hand domain pair	2.7E-07	20	30.00	21	71
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.00059	9	21.30	39	74
EF-hand_8	EF-hand domain pair	7.7E-06	15	28.00	45	69
EF-hand_7	EF-hand domain pair	7.5E-16	48	30.00	49	111
EF-hand_6	EF-hand domain	1.1E-08	24	25.00	49	78
EF-hand_1	EF hand	1.2E-08	24	25.40	49	75
EF-hand_5	EF hand	1.2E-09	27	25.90	50	73
Dockerin_1	Dockerin type I repeat	0.0067	6	20.50	55	67
Dockerin_1	Dockerin type I repeat	0.00042	10	20.50	57	106
EF-hand_8	EF-hand domain pair	1.5E-13	40	28.00	61	111
EF-hand_4	Cytoskeletal-regulatory complex EF hand	9.4E-07	18	21.30	80	110
EF-hand_1	EF hand	7.4E-10	27	25.40	85	111
EF-hand_6	EF-hand domain	4E-07	19	25.00	87	111
EF-hand_5	EF hand	1E-07	21	25.90	94	110
EF-hand_7	EF-hand domain pair	3.6E-10	30	30.00	122	185
EF-hand_6	EF-hand domain	0.022	4	25.00	123	152
EF-hand_8	EF-hand domain pair	3.3E-14	42	28.00	138	184
SPARC_Ca_bdg	Secreted protein acidic and rich in cysteine Ca binding region	0.06	3	21.40	157	180
EF-hand_1	EF hand	8.2E-09	24	25.40	160	185
EF-hand_6	EF-hand domain	6.3E-06	15	25.00	166	185
EF-hand_5	EF hand	1.9E-05	14	25.90	167	183
EF-hand_4	Cytoskeletal-regulatory complex EF hand	0.00097	9	21.30	168	185